Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01971 ATGTCTTCTTCCAACAGACACTGGCCAAACATGTTCAAATCCAAGCCTTGCAATAATCCCCATAACCAATGGCAGCATGACATCAACTCCTCTATAGTTTCCACCGGAGGATACCAAAGAAGCCCTTATGCTTCAGGAGGTGAAgagagaactccagaaccaaagccaagatggaacccaaaaccggagcaaatccgcattctggaagccatcttcaattcTGGGATGGTGAATCCCCCAAGGGATGAGATAAGGAAGATACGGGTGCAGTTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAGTCCAGGAGCAAGCACAAGCTCCGCCACTTCCAAAACTCGATGAACCAAAACCATAATGCAGAAGCACAACAACAACAGAAGGTTGATGCTTCTTCTCTCTCTCAGACCACACCACCTTCTTCCTCATCCTCTTCATCTGACAAATCATCTTCAAAGGAATTAGCATACCCTATTGGATTCTCCTTTGGCTTCTCAAATGTCAATGATGTTGCAGTGCCTAATTCTCCCGCTGCTTCTGTGAATCAGACTTATTTTCAGCCTCATAACCACATTGACAACAATTTGCTACCACAAGCTACTGAGCCTTTTTCCTTTACCATGCACAACAATAATGTGCAAGGTGTAGTGGATAAAAATACCATAACAACACTTGGGTTTTCTGTCCCTCAATTCTCCAGCAATATGATGCAATCTCAACTTCAGTGTCAACAAAATGTTGGGCCTTGCACTAGTCTTTTGCTTAATGAAATCATGAATTATGGAACCTTGTCAAAGAAAGACCAAGATGAAGACAAGGCATTGAAGATAACGCGTCCACAACTTAGTTTCCCTCTCACTTCAACTCCTCCAACCACAACCATTGCTCCTTCAATCTCAACCGTTCCATGTCCCATCACTCAACTTCAAGGTGTTGGTGAGGTTGCAGGAGATAGGGCAAAATGTACAGTGTTCATTAATGGTGTTGAATTTGAGGTTGTGATGGGACCCTTCAACGTGCACCAAGCCTTTGGAGATGAAGCCGTGCTTATCCACTCTTCCGGCAATCCTGTTCCTACCGATAAGAGAGGCATTACCCTTCACCCACTGCACCATGGTGCTTATTACTATTTGGTGTGTGCATGTTTTCATTAA 1182 0.412 MSSSNRHWPNMFKSKPCNNPHNQWQHDINSSIVSTGGYQRSPYASGGEERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHKLRHFQNSMNQNHNAEAQQQQKVDASSLSQTTPPSSSSSSSDKSSSKELAYPIGFSFGFSNVNDVAVPNSPAASVNQTYFQPHNHIDNNLLPQATEPFSFTMHNNNVQGVVDKNTITTLGFSVPQFSSNMMQSQLQCQQNVGPCTSLLLNEIMNYGTLSKKDQDEDKALKITRPQLSFPLTSTPPTTTIAPSISTVPCPITQLQGVGEVAGDRAKCTVFINGVEFEVVMGPFNVHQAFGDEAVLIHSSGNPVPTDKRGITLHPLHHGAYYYLVCACFH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01971 393 SMART HOX_1 53 120 IPR001356 GO:0003677
Gma07g01971 393 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Gma07g01971 393 MobiDBLite consensus disorder prediction 1 41 - -
Gma07g01971 393 MobiDBLite consensus disorder prediction 128 161 - -
Gma07g01971 393 CDD homeodomain 54 116 IPR001356 GO:0003677
Gma07g01971 393 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
Gma07g01971 393 MobiDBLite consensus disorder prediction 1 60 - -
Gma07g01971 393 Gene3D - 55 124 - -
Gma07g01971 393 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Gma07g01971 393 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 390 IPR044557 GO:0003700|GO:0050793
Gma07g01971 393 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01971 Gma-Chr7 41061875 41063946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01971 1 388 Wox Gene Family AT5G45980 38.653 6.93e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma07g01971 Homeodomain 3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01971 - - gmx:100777643 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01971 07 41061875 41063946 Gma07g01971 07 41061875 41063946 ECH