Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01964 ATGGCTGGTCTCATCGATCTCAACAACGCAACCGAAGACGATGAAATGCCGTCGTCTGGCTCCTCCTCCACCGTGTGCCTCGAGCTCTGGCACGCCTGCGCGGGTCCATTGATTTCCTTGCCCAAGAAAGGGAGTGTTGTCGTGTACTTCCCTCAGGGACACTTGGAGCAACACCTTCACGATTTTCCGCTCCCTGCCTCTGCCAACATCCCCTCCCATGTCTTCTGTCGCGTCCTCGATGTCAAGCTTCATGCTGAGGAAGGGAGTGATGAAGTTCATTGCCAGGTGGTGCTGGTTCCCGAAACTGAGCAAGTACATCAGAAGCTGCGGGAGGGGGAATTTGATGCTGATGGTGAAGAGGAGGATGCTGAAGCTGTGATGAAGTCCACGACGCCCCACATGTTCTGCAAGACTTTGACTGCTTCTGATACCAGCACTCATGGTGGATTCTCCGTGCCTCGTCGCGCTGCGGAAGATTGCTTCCCTCCCCTGGATTACAGTCAACAGAGGCCTTCACAGGAGCTTGTGGCGAAGGATCTCCATGGCCAGGAATGGAGGTTTCGACATATTTATAGGGCAGGGCAGCCACGAAGACACTTGCTTACTACCGGTTGGAGTGCATTTGTGAACAAGAAGAAACTTGTATCTGGAGATGCTGTTCTGTTTCTTAGGGGTGAGGATGGAGAATTGAGATTGGGAATTCGTAGGGCGGCTCAATTGAAAAGTGGCAGTACCTTTTCAGCTCTTTCTGGCCAGCAATTGAGTCCTACCAGTCTTATGGATGTGGTTAATGCTTTGTCTGCAAGATGTGCCTTTAGCATTCACTATAATCCGAGGGTCAGTACATCTGAGTTCATCATACCTATCCACAGATTCTTAAAGAGCCTTGATTATTCTTATTCAGCTGGAATGAGGTTCAGGATGCGCTTCGAAACCGAAGATGCTGCAGAGCGAAGATTCACAGGATTAATTGTTGGAATTGCTGATGTGGATCCTGTTAGATGGCCTGGATCTAAATGGAGATGCCTAATGGTAAGGTGGGATGACTTAGAAGTCACAAGGCATAATAGGGTTTCCCCATGGGAGATTGAGCCATCTGGTTCTGCTTCTACTGCAAATAACTTGATGTCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAGCCAAGCTAGAATTTCCAGTTTCCAATGCGATTGGAACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATGTTGGGTGTTAATCCTACTTATGATAGTATTAATGCTCAGAGTCACCAGGTATCTGATTTGAGGAGGTGCTATCCTGTCTCAAACTATCCTAGGATTGCTGCAACAGGAAATAGCATTGGAATCCCACAAGTGAGTTCCAATGTTTCCAGCAATGGCATAGGCTTTAGTGAATCTTTCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGCCAACCATATGGAAGGGCCCTGTCTGTTGATGAGGCTTGTGGAAATAGTCGCTGTGGACTCTTTGATGGTTACCAGGTGATGAGATCCAGAAATGGATGGTGTTCCGACATGAGTAACAATTCCTCAAATTTGCATCCTCCTGTTCCATCTGGGCAAGTTTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTCAATCTAGTTTCAAACTCCGATTATAACAACAAAATTAGTCAGGTGATGGGAGGTAAGTTCCATCAACGAGTTTCATATGCTTCTGATGTTAAAGGTGGAAAATTTGTATCAACCCCCTATGAGCCTCTTCTCTGTGGACTAGCTAAGGAAGGCACAAATTCTTTTGGTCTTTCAAACTTTCATAATCAGCTGGATAGTTCACGTTCACACGATTCCATATCAGTACTGAGAGCTAATCAAGAGTTGGTTCCCTCGTGTAAAAGTAGTTGCAGAGTCTTTGGTTTTTCATTAACTGAGGTTGCTCCCATTGCAAATAAAGAGGCTGCTGACTCATCTTCTGTAGCATGTTCTGGACCTTCCTTTACAAGACACGTTGATGATGATTTCCATCCAGGGCATTCACTTAGGAGCAAGGCAGTGGCAAGTTATTGCACCAAGGGTGTGCTGCAATATTGA 2133 0.4632 MAGLIDLNNATEDDEMPSSGSSSTVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQHLHDFPLPASANIPSHVFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQLSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETEDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLEVTRHNRVSPWEIEPSGSASTANNLMSAGLKRTKIGLPSAKLEFPVSNAIGTSDFGESLRFQKVLQGQEMLGVNPTYDSINAQSHQVSDLRRCYPVSNYPRIAATGNSIGIPQVSSNVSSNGIGFSESFRFQKVLQGQEIFPSQPYGRALSVDEACGNSRCGLFDGYQVMRSRNGWCSDMSNNSSNLHPPVPSGQVSSPSSVLMFQQAVNLVSNSDYNNKISQVMGGKFHQRVSYASDVKGGKFVSTPYEPLLCGLAKEGTNSFGLSNFHNQLDSSRSHDSISVLRANQELVPSCKSSCRVFGFSLTEVAPIANKEAADSSSVACSGPSFTRHVDDDFHPGHSLRSKAVASYCTKGVLQY 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01964 710 Pfam Auxin response factor 263 343 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma07g01964 710 Gene3D - 133 238 IPR015300 -
Gma07g01964 710 SUPERFAMILY DNA-binding pseudobarrel domain 128 245 IPR015300 -
Gma07g01964 710 ProSiteProfiles B3 DNA-binding domain profile. 135 238 IPR003340 GO:0003677
Gma07g01964 710 Pfam B3 DNA binding domain 135 237 IPR003340 GO:0003677
Gma07g01964 710 CDD B3_DNA 133 236 IPR003340 GO:0003677
Gma07g01964 710 SMART B3_2 135 238 IPR003340 GO:0003677
Gma07g01964 710 Gene3D - 299 373 - -
Gma07g01964 710 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 710 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma07g01964 710 PANTHER AUXIN RESPONSE FACTOR 17 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01964 Gma-Chr7 40971220 40976282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01964 20 490 B3 DNA Binding Superfamily AT5G60450 50.622 3.04e-142 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma07g01964 B3 1.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01964 K14486 - gmx:100796970 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01964 07 40971220 40976282 Gma07g01964 07 40971220 40976282 ECH