Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01960 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGATCAACTGGTTGCACCAACAATTACTCCTACTTCAACTAATAACACTACTGTTCTTACTGATCATCGCACAAAAGCAAGCGAAATTCGCACCTTAACTTGCCCCTCATGTGGCCAAAACATTGAATTCCAAGACCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAGGTACTGTCTGACGTGCCAAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAATGGGATCTGTTATACGCATCCAGAAAAGCTTCCAGGTGTAAGAAAAGATGGGCAAATCCGCCACTTCTTTCACAGGCCATCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACCGACGAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACTAGACCCGTTTTTGTTGGTGGTGCTGTGAAGGGGTTCAAGAAAATCCTAGTCCTCTACACCAACTATGGAAGGCAAAAGAAGCCTGAGAAGACCAATTGGGTGATGCATCAATACCACCTTGGCACTAGCGAAGAAGAGAAAGATGGAGAATTGGTGGTTTCAAAGGTTTTCTACCAAACACAACCTCGACAATGTGGTAATTCCATTATAAAGCAGGATCTTTATGATGAAGAAAGATTGATGACTAACCAAAGTGTCCATAATGATGATGACAACAATATAATACCTAGAAATAATAATGCAAGTGCTCTTATGGACTACTACAATCCTTCTTTCATAAATTATGACCAATTGGGTGGTCGTAGTAATAGGGAAAATTCACCTCAACTTATTCCAAATTTGGTCATGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAAAGCCAAGATGGACAGAAAATAG 981 0.4159 MTWCNDSDEERGIDQLVAPTITPTSTNNTTVLTDHRTKASEIRTLTCPSCGQNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTSEEEKDGELVVSKVFYQTQPRQCGNSIIKQDLYDEERLMTNQSVHNDDDNNIIPRNNNASALMDYYNPSFINYDQLGGRSNRENSPQLIPNLVMQGDSSSFIRLAMDATKAKMDRK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01960 326 ProSiteProfiles NAC domain profile. 68 227 IPR003441 GO:0003677|GO:0006355
Gma07g01960 326 Pfam No apical meristem (NAM) protein 69 208 IPR003441 GO:0003677|GO:0006355
Gma07g01960 326 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 310 - -
Gma07g01960 326 Gene3D NAC domain 77 231 IPR036093 GO:0003677|GO:0006355
Gma07g01960 326 SUPERFAMILY NAC domain 64 227 IPR036093 GO:0003677|GO:0006355
Gma07g01960 326 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 310 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01960 Gma-Chr7 40920353 40923996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01960 1 237 NAC Transcription Factor Family AT4G28500 70.588 4.55e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma07g01960 NAM 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01960 - - gmx:100795920 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01960 07 40920353 40923996 Gma07g01960 07 40920353 40923996 ECH
Gma07g01960 07 40920353 40923996 Gma06g02588 06 49164119 49167123 ECH