Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01959 ATGAACCATGACACGTACATTGCTTATGATGTGGTCATGGTTGCTCTATCCATATCCTTCTTTGTTCTTGCTGTTGTTCTCTACCTTGTGTGTAAGAAGAAACCGGTTAACGTTGAATCCGAAGAAACACTTGCATTGAAGCATTGTGTTCGTGCATACTCATTGATGGACATTGATGCTGCCACTGATGGCTTCGACCATAGCAGAATTGTGGGGAAGGGTCGCGTAGGAACCGTGTATGCCGCGGTGCAAGAGAATGGAGAACTTGTGGCTGTGAAAAGGATTCATTCTGTGCTTGTGTTGAGCAATGCAGGATTTGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGCTCACCACCCCAACATAGTTCCCATCATAGGATTCTCGGAGGCACCTGGTGAGAGGATCATAGTGATGGAGTTTGGGCGCATGGTGAGTTTGGACTTCTATTTGCACCAAAATGTTAATGGGGCATCACTCTTGGATTGGAACAAGAGGATCAGAATTGCGGCTGGAGCAGCTAGAGGGATTCAGTACCTGCATGAAGTGGCAACACCAAACATTGTACATGGGTGTGTCAAGTCCTCAAATGTTTTAATTGATGTCAACTTTTGTACTAGGATTTGTGATTATGGACTCAACTTCTTGGCACCCCGAGAAAAGAGAGGGCTAGTAGGGAATGTGGATGATGAGTATTGGAATGAAGAAGGGGGTGGTGCTAGCAAGGAAAGTGACGTTTATGGGTTGGGTGTGGTCATGCTTGAGCTATTAAGTGGTAGAGGGTGTGAGGAAGGATTGATAGCAAAATGGGCAATGCCTTTGATCAAGGAAATGAGTTTTGGTGAACTTTTGGATGCTAGGTTGGTGATTCCTTCTGACATGAAGCCTCTTGTTAGGTTAGCTAAAGTTGCTTTAGCTTGTGTTGGTAATTCAAGGAAGTGTAGGCCTTCCATTGCTCAAGTGACAACTATTTTGAACAATATAGAGATGGAAGTGTGCATATGA 1008 0.4435 MNHDTYIAYDVVMVALSISFFVLAVVLYLVCKKKPVNVESEETLALKHCVRAYSLMDIDAATDGFDHSRIVGKGRVGTVYAAVQENGELVAVKRIHSVLVLSNAGFGFSSVLKWLSSAHHPNIVPIIGFSEAPGERIIVMEFGRMVSLDFYLHQNVNGASLLDWNKRIRIAAGAARGIQYLHEVATPNIVHGCVKSSNVLIDVNFCTRICDYGLNFLAPREKRGLVGNVDDEYWNEEGGGASKESDVYGLGVVMLELLSGRGCEEGLIAKWAMPLIKEMSFGELLDARLVIPSDMKPLVRLAKVALACVGNSRKCRPSIAQVTTILNNIEMEVCI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01959 335 ProSiteProfiles Protein kinase domain profile. 65 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01959 335 Gene3D Transferase(Phosphotransferase) domain 1 145 333 - -
Gma07g01959 335 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 2 334 - -
Gma07g01959 335 SUPERFAMILY Protein kinase-like (PK-like) 46 326 IPR011009 -
Gma07g01959 335 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 334 - -
Gma07g01959 335 PIRSF ILK 37 334 - -
Gma07g01959 335 Gene3D Phosphorylase Kinase; domain 1 28 142 - -
Gma07g01959 335 Pfam Protein kinase domain 67 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01959 Gma-Chr7 40901958 40902965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01959 42 326 Receptor kinase-like Gene Family AT3G59420 39.667 1.83e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma07g01959 Pkinase 8.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01959 - - gmx:100795393 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01959 07 40901958 40902965 Gma07g01959 07 40901958 40902965 ECH
Gma07g01959 07 40901958 40902965 Gma15g00741 15 6090322 6092097 PCT
Gma07g01959 07 40901958 40902965 Gma13g02082 13 35958839 35959849 PCT
Gma15g00741 15 6090322 6092097 Gma07g01959 07 40901958 40902965 PCT
Gma13g02082 13 35958839 35959849 Gma07g01959 07 40901958 40902965 PCT