Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01958 ATGACAAACCCAAAACCACTCATAGTCATAGTTTACATTCTCTTGTCACTACTAGCAACAACAACAACAACAACGTTGGTGTCGTGTCTGAACCAAGAAGGCTTATACCTCTACCAGCTGAAACTCTCCTTTGACGACCCAGACTCGAGGCTCTCCTCATGGAACTCGCGAGACGCCACTCCCTGCAACTGGTTCGGCGTAACCTGCGACGCCGTATCAAACACCACCGTAACGGAGTTGGACCTCTCCGACACCAACATCGGAGGCCCATTCCTCGCCAACATCCTCTGCCGTCTCCCCAACCTCGTTTCTGTTAATCTTTTCAACAACTCCATCAACGAAACCCTACCCCTCGAAATCTCCCTCTGCAAAAACCTCATTCACCTCGACCTCTCCCAGAATCTCCTCACTGGCCCACTCCCCAACACGCTCCCTCAACTTGTTAACCTCAAATACCTCGACCTCACCGGCAACAACTTCTCCGGCTCCATCCCTGATTCCTTCGGAACCTTCCAGAACCTCGAAGTCCTCTCCCTCGTTTCGAATCTTCTGGAAGGCACAATCCCAGCCTCCTTGGGTAATGTGAGTACTTTGAAGATGCTGAACTTAAGTTACAACCCCTTTTTCCCGGGTCGGATCCCGCCGGAGATTGGAAACCTAACCAACCTTGAAGTACTCTGGCTAACGCAATGCAACCTCGTCGGCGTCATCCCAGCCTCCCTGGGGAGGTTGGGAAGGCTCCAGGATCTGGACCTCGCGCTCAACGACCTCTACGGCTCCATCCCGAGTTCGCTCACTGAGTTAACCAGCTTGAGGCAGATCGAGCTGTACAACAACTCGCTCTCCGGGGAGCTTCCGAAGGGAATGGGGAACCTCTCTAACTTGAGGCTCATCGACGCGTCGATGAACCACTTGACCGGAAGTATTCCGGAGGAGCTCTGTTCACTTCCGTTGGAGAGTCTTAACCTTTACGAGAATCGCTTCGAGGGCGAGTTGCCGGCGAGCATTGCTAATTCGCCGAATTTGTATGAATTGAGGCTTTTCGGTAACCGGCTTACCGGAAGGTTACCGGAGAATCTCGGCAAAAACTCGCCTCTCCGGTGGCTTGATGTTTCCAGCAACCAGTTCTGGGGGCCCATTCCGGCGACGCTGTGTGACAAGGTAGTGCTAGAGGAGCTTCTGGTGATTTACAATCTTTTCTCCGGGGAGATTCCGTCGAGCCTCGGCACGTGCCAGAGCCTGACACGTGTGAGGCTCGGCTTCAACCGGCTCTCCGGGGAGGTTCCCGCGGGGATCTGGGGGCTGCCGCACGTGTATCTCCTCGAGCTTGTGGATAACTCGTTTTCCGGTTCCATTGCGAGGACCATTGCTGGTGCTGCGAACTTGTCGCTGTTGATTTTGTCGAAGAACAACTTCACTGGAACGATTCCCGATGAGGTTGGGTGGTTGGAGAATCTTGTTGAGTTTTCAGCTAGTGATAATAAATTCACTGGTTCTCTTCCTGATAGTATTGTGAATCTTGGGCAGCTCGGGATTCTTGATTTTCATAACAATAAGCTCTCTGGGGAGCTTCCTAAGGGGATTCGTTCGTGGAAGAAGCTCAACGATTTGAATTTGGCGAACAATGAGATTGGTGGGAGGATTCCTGATGAGATTGGGGGTTTGTCCGTGCTGAATTTTCTGGATCTTTCTAGAAACCGGTTTTCGGGGAAAGTGCCTCATGGGTTGCAGAATCTGAAGCTGAATCAGCTCAATTTGTCTTATAATCGGTTATCCGGTGAATTACCTCCTTTGTTGGCTAAGGATATGTACAAGTCTAGTTTTCTAGGGAATCCTGGGTTGTGTGGGGATTTGAAGGGGTTGTGTGATGGTAGAAGTGAGGAGAGGAGTGTGGGTTATGTTTGGCTGCTTCGAACGATTTTCGTTGTTGCCACTTTGGTTTTCCTTGTTGGTGTGGTTTGGTTTTACTTTAGGTACAAAAGTTTCCAGGATGCGAAGAGGGCGATCGATAAGTCAAAGTGGACATTGATGTCGTTTCATAAGCTGGGTTTTAGTGAAGATGAGATTTTGAATTGTCTTGATGAGGATAATGTGATTGGAAGTGGATCGTCTGGGAAGGTCTACAAGGTTGTGCTTAGCAGTGGGGAGTTTGTGGCTGTGAAGAAGATATGGGGAGGGGTTAGGAAGGAGGTGGAGAGTGGGGATGTTGAGAAGGGTGGTAGGGTTCAGGACAATGCTTTTGATGCTGAGGTTGAAACTTTGGGTAAAATCAGGCACAAGAATATTGTTAAGCTGTGGTGTTGCTGCACCACTAGGGATTGCAAGCTCTTGGTTTATGAATATATGCCTAATGGAAGTCTTGGTGATTTGCTTCATAGCAGTAAGGGAGGGTCGttggattggccaacaaggtacaagatagctgtggatgctgcagaaggcctctcttatctgcatcatgactgtgttcccgcaattgttcatagagatgtgaaatctaacaatattttgttGGATGGGGACTTCGGTGCGAGGGTGGCTGATTTTGGAGTAGCTAAGGCGGTTGAAACCACACCGATAGGAACTAAATCCATGTCCGTCATAGCTGGCTCTTGTGGCTATATTGCACCAGAATATGCATACACTCTTAGAGTGAATGAGAAGAGCGACATATACAGTTTTGGGGTTGTCATACTCGAGTTGGTCACCGGAAAACACCCAGTGGACCCTGAATTTGGGGAGAAAGACTTGGTTAAGTGGGTGTGCACAACCTGGGACCAGAAAGGTGTGGACCATTTAATTGACTCAAGGCTTGATACTTGTTTCAAAGAAGAGATTTGCAAGGTCTTCAACATTGGACTCATGTGTACTAGTCCTCTTCCCATCAACCGGCCTTCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGGTTAGCACAGAGGACCAAACCAAGCCTGCCAAGAAAGATAGCAAGTTATCCCCTTATTACTATGACGATGCCTCGGATCATGGAAGTGTTGTTTAA 3024 0.4739 MTNPKPLIVIVYILLSLLATTTTTTLVSCLNQEGLYLYQLKLSFDDPDSRLSSWNSRDATPCNWFGVTCDAVSNTTVTELDLSDTNIGGPFLANILCRLPNLVSVNLFNNSINETLPLEISLCKNLIHLDLSQNLLTGPLPNTLPQLVNLKYLDLTGNNFSGSIPDSFGTFQNLEVLSLVSNLLEGTIPASLGNVSTLKMLNLSYNPFFPGRIPPEIGNLTNLEVLWLTQCNLVGVIPASLGRLGRLQDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPKGMGNLSNLRLIDASMNHLTGSIPEELCSLPLESLNLYENRFEGELPASIANSPNLYELRLFGNRLTGRLPENLGKNSPLRWLDVSSNQFWGPIPATLCDKVVLEELLVIYNLFSGEIPSSLGTCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGSIARTIAGAANLSLLILSKNNFTGTIPDEVGWLENLVEFSASDNKFTGSLPDSIVNLGQLGILDFHNNKLSGELPKGIRSWKKLNDLNLANNEIGGRIPDEIGGLSVLNFLDLSRNRFSGKVPHGLQNLKLNQLNLSYNRLSGELPPLLAKDMYKSSFLGNPGLCGDLKGLCDGRSEERSVGYVWLLRTIFVVATLVFLVGVVWFYFRYKSFQDAKRAIDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEFVAVKKIWGGVRKEVESGDVEKGGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGSLDWPTRYKIAVDAAEGLSYLHHDCVPAIVHRDVKSNNILLDGDFGARVADFGVAKAVETTPIGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKHPVDPEFGEKDLVKWVCTTWDQKGVDHLIDSRLDTCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVSTEDQTKPAKKDSKLSPYYYDDASDHGSVV 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01958 1007 Pfam Leucine Rich repeats (2 copies) 124 164 IPR025875 -
Gma07g01958 1007 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gma07g01958 1007 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 989 - -
Gma07g01958 1007 Gene3D Ribonuclease Inhibitor 269 339 IPR032675 -
Gma07g01958 1007 Gene3D Ribonuclease Inhibitor 210 268 IPR032675 -
Gma07g01958 1007 SUPERFAMILY RNI-like 79 426 - -
Gma07g01958 1007 SUPERFAMILY L domain-like 390 615 - -
Gma07g01958 1007 SMART LRR_typ_2 555 578 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 171 195 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 147 170 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 268 292 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 220 244 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 99 123 IPR003591 -
Gma07g01958 1007 SMART LRR_typ_2 507 531 IPR003591 -
Gma07g01958 1007 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Gma07g01958 1007 PANTHER LRR RECEPTOR-LIKE KINASE 5 989 - -
Gma07g01958 1007 ProSiteProfiles Protein kinase domain profile. 693 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01958 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Gma07g01958 1007 SMART serkin_6 693 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01958 1007 Pfam Protein kinase domain 695 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01958 1007 Gene3D Phosphorylase Kinase; domain 1 677 781 - -
Gma07g01958 1007 Gene3D Ribonuclease Inhibitor 340 624 IPR032675 -
Gma07g01958 1007 Gene3D Transferase(Phosphotransferase) domain 1 782 1001 - -
Gma07g01958 1007 Gene3D Ribonuclease Inhibitor 28 209 IPR032675 -
Gma07g01958 1007 SUPERFAMILY Protein kinase-like (PK-like) 688 975 IPR011009 -
Gma07g01958 1007 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01958 Gma-Chr7 40891380 40894863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01958 27 1007 Receptor kinase-like Gene Family AT1G28440 71.327 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma07g01958 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01958 - - gmx:100819887 1955.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01958 07 40891380 40894863 Gma07g01958 07 40891380 40894863 ECH
Gma07g01958 07 40891380 40894863 Gma06g02589 06 49172490 49176167 ECH