Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01942 ATGGTACCGATTACAAGTGAAACAAAGAACGAGAGTGGCAACGAGGTACATTATCGAGGAGTGAGGAAAAGGCGATGGGGAAAAGATGTGGCTGAGATCAGAAACCCTAACAAGAAGACACGTACGTGGCTTGGTACCTTTGACTCTGCCATAGAAGCCGCCAAAGCTTGGGATGTCGCGGCCATCAAGTTTCGTGGCCCTGACAAGGCCATAACTAATTAA 222 0.482 MVPITSETKNESGNEVHYRGVRKRRWGKDVAEIRNPNKKTRTWLGTFDSAIEAAKAWDVAAIKFRGPDKAITN 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01942 73 Gene3D AP2/ERF domain 16 73 IPR036955 GO:0003700|GO:0006355
Gma07g01942 73 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Gma07g01942 73 SUPERFAMILY DNA-binding domain 17 69 IPR016177 GO:0003677
Gma07g01942 73 SMART rav1_2 17 73 IPR001471 GO:0003700|GO:0006355
Gma07g01942 73 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 73 - -
Gma07g01942 73 CDD AP2 17 73 IPR001471 GO:0003700|GO:0006355
Gma07g01942 73 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Gma07g01942 73 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Gma07g01942 73 ProSiteProfiles AP2/ERF domain profile. 17 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01942 Gma-Chr7 40677814 40678035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01942 15 73 AP2-EREBP Transcription Factor Family AT5G44210 69.492 4.33e-22 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma07g01942 AP2 1.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01942 K09286 - csin:114262234 89.7373