Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01933 ATGGAACAAGAAGGAGAAAAAGGGAGAGAGGAGAGAAGACAAGTTCAACGTGCAGCAACACAACAACCTCCTCAGCAGCATCAGAAATGTCCACGCTGCGGTTCCATGAACACCAAGTTCTGCTATTTCAACAACTATAGCCTCTCGCAGCCTCGTCACTTCTGCAAAACGTGTAAAAGGTACTGGACACACGGTGGAACCTTCAGGAACATACCCGTTGGTGGCGGTTCCCGCAAAGTGAAGCGTGGCAAAACAAATTCTTCATCTTTTTCTTCTTCTTCTTCTTCATCTTCCAATTTGCTCACACAGCCACAGCAGAATCTGTTGATGAGGCCTTCACCACCCCTTATCACTACTATGGTTCAGTCTACTAGCCCTTACTATCATCTTGCTGGTGGAAGTGGGTATTTGTCTTCTCTTGCAACACTTCATTCTCTGAACAACAACACATCACAGCCTTTCAATCAGTACCTGAAAGTTGGTGGTGATTTTGCTGGTTCTTCTAATTCTCCTCTTGTGTCTGGCTTCAACGCTGCTTATTCGCTTCCACCGCGATTCCCCCAGCAACAATCTATGTATCCTGCacaacaacaacaacaacagcaacaacgtttgattccatcaaatatggctagcAGCGGTGCTGTTTCTCATTCGGCTCTTCGCACGCAAAGCTTGATCAACAATGTTTCAACAAGTACAAACCATAGGGCTAGTATTTCTGATGCTTCTTTGTGGAGTGCTGCTACTGTCAACACCACTTCCATCGGTGGAAACTCTGATCAGAACAATGTCGTCAAAGGAGGTTCTTCTTCTTTGGTCCCAAGTCATTGGCTTCATCGCCCTGGGTTTGGTCCTCCTCAATAA 867 0.4348 MEQEGEKGREERRQVQRAATQQPPQQHQKCPRCGSMNTKFCYFNNYSLSQPRHFCKTCKRYWTHGGTFRNIPVGGGSRKVKRGKTNSSSFSSSSSSSSNLLTQPQQNLLMRPSPPLITTMVQSTSPYYHLAGGSGYLSSLATLHSLNNNTSQPFNQYLKVGGDFAGSSNSPLVSGFNAAYSLPPRFPQQQSMYPAQQQQQQQQRLIPSNMASSGAVSHSALRTQSLINNVSTSTNHRASISDASLWSAATVNTTSIGGNSDQNNVVKGGSSSLVPSHWLHRPGFGPPQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01933 288 MobiDBLite consensus disorder prediction 81 105 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 187 214 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 72 105 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 17 31 - -
Gma07g01933 288 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Gma07g01933 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 288 IPR045174 GO:0003700|GO:0006355
Gma07g01933 288 MobiDBLite consensus disorder prediction 1 16 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 256 288 - -
Gma07g01933 288 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 15 288 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 256 271 - -
Gma07g01933 288 MobiDBLite consensus disorder prediction 1 31 - -
Gma07g01933 288 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Gma07g01933 288 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01933 Gma-Chr7 40568300 40569166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01933 22 105 C2C2-Dof Transcription Factor Family AT5G60200 60.714 1.28e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma07g01933 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01933 - - gmx:100814555 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01933 07 40568300 40569166 Gma07g01933 07 40568300 40569166 ECH
Gma07g01933 07 40568300 40569166 Gma15g00718 15 5898779 5899989 PCT
Gma07g01933 07 40568300 40569166 Gma13g02109 13 36213093 36214240 PCT
Gma15g00718 15 5898779 5899989 Gma07g01933 07 40568300 40569166 PCT
Gma13g02109 13 36213093 36214240 Gma07g01933 07 40568300 40569166 PCT