LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g01916	ATGGATGAAGATAGCAGTAATTCTTGGATAAGGAGGGCCAAATTCTCCCACACAGTGTGTCACAGGTTGAACTATTCCAGTTCTGGATTTGGCTCTTTCAGCATTCAGCCAAGGGCACAGCACAGTTCTAGTCTGAAATCAAGGCCTGAAGTGGCTTTTGCCTCCAAGGCTTCTTCACAGGCTCAGAAGAAACCAATAATGAACAAGCAGAGATCTTTGTCCCCTTTGCCTCAAACCTCTCTCTCTGAGACCTTCAAGGAAGCCAGACATGAGCAGAAGAGGTTCTCAACACCTGGTCCAAGGAGGAAAGAGCAGGACAAGGACAAGAGAATCATGGGGAAGTTGCTCAACAAGGATTCTCATGTGTTCAATTCCAAATCCAATCACAGCAGTCCAATTACTACTAAATCCCCTTACAGCAGTCCAATTAGGCACCTTGCTTCGATGAAATTAAGTGACAAGTCGAAGCAGCACCGCAAGGATTTGGGATGGACAAAGTACTTTGACCATGGAGGGGGAAAGGTTACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGACCTCTCCAAGCTCTTTGTTGGTGTTAGGTTTGCCCATGGTGCTCACAGCAGGCTTTACCATGGCATGTATAAGGATGAAGCTGTTGCTGTGAAAATTATCACGGTACCGGATGATGACGAAAACGGAATGTTGGCGGATCGATTAGAGAAACAATTCATTAGAGAAGTCTCGCTTTTATCGCGCCTCCACCACCAAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCACCTGTTTATTGTGTTATCACAGAATATCTATCAGAAGGTTCCTTGAGGTCATATTTGCATAAGTTGGAAAGAAAAACTATTCCTCTAGAGAAGCTAATTGCTTTTGCTCTGGACATTGCTCGTGGAATGGAGTATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAACGTCCTTATTAAAGAAGACTTTCACCTTAAAATTGCTGACTTTGGCATTGCTTGTGAGGAAGCGTACTGTGACTTATTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGAAAGGTTGATGTATATAGTTTTGGACTTATCTTATGGGAAATGGTGACTGGAACTATACCATATGAGGACATGACTCCCATCCAGGCTGCTTTTGCCGTAGTAAATAAGAATGTAAGGCCAGTTATTCCTTCAAACTGTCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGCATCCGGACAAGAGGCCCGAGTTCTGGCAGGTTGTTAAGGTATTAGAACAATTTGAGTCTTCGCTTGCTCATGATGGAACTCTGACTCTGGTGGAAAATCCTTGTTGCCCTGATCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCATAATAATGGCCCTGTGCCTAAACCGAAATTTACATGA	1497	0.4402	MDEDSSNSWIRRAKFSHTVCHRLNYSSSGFGSFSIQPRAQHSSSLKSRPEVAFASKASSQAQKKPIMNKQRSLSPLPQTSLSETFKEARHEQKRFSTPGPRRKEQDKDKRIMGKLLNKDSHVFNSKSNHSSPITTKSPYSSPIRHLASMKLSDKSKQHRKDLGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGVRFAHGAHSRLYHGMYKDEAVAVKIITVPDDDENGMLADRLEKQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLSEGSLRSYLHKLERKTIPLEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLIKEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNVRPVIPSNCPPAMRALIEQCWSLHPDKRPEFWQVVKVLEQFESSLAHDGTLTLVENPCCPDHKKGLLHWIQKLGPVHHNNGPVPKPKFT	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g01916	498	PANTHER	TYROSINE KINASE FAMILY PROTEIN	4	474	-	-
	Gma07g01916	498	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	4	474	-	-
	Gma07g01916	498	Gene3D	Transferase(Phosphotransferase) domain 1	276	465	-	-
	Gma07g01916	498	MobiDBLite	consensus disorder prediction	120	141	-	-
	Gma07g01916	498	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	315	327	IPR008271	GO:0004672\|GO:0006468
	Gma07g01916	498	CDD	STKc_MAP3K-like	198	447	-	-
	Gma07g01916	498	MobiDBLite	consensus disorder prediction	84	116	-	-
	Gma07g01916	498	SMART	serkin_6	191	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma07g01916	498	ProSiteProfiles	Protein kinase domain profile.	191	451	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma07g01916	498	PRINTS	Tyrosine kinase catalytic domain signature	271	284	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	PRINTS	Tyrosine kinase catalytic domain signature	309	327	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	PRINTS	Tyrosine kinase catalytic domain signature	355	365	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	PRINTS	Tyrosine kinase catalytic domain signature	374	396	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	PRINTS	Tyrosine kinase catalytic domain signature	418	440	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	Gene3D	Phosphorylase Kinase; domain 1	179	275	-	-
	Gma07g01916	498	Pfam	Protein tyrosine and serine/threonine kinase	197	447	IPR001245	GO:0004672\|GO:0006468
	Gma07g01916	498	SUPERFAMILY	Protein kinase-like (PK-like)	178	447	IPR011009	-
	Gma07g01916	498	MobiDBLite	consensus disorder prediction	31	83	-	-
	Gma07g01916	498	MobiDBLite	consensus disorder prediction	31	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma07g01916	Gma-Chr7	40402145	40405335	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma07g01916	1	498	MAP Kinase Kinase Kinase	AT5G58950	57.885	0.0	608

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Gma07g01916		PK_Tyr_Ser-Thr	4.2e-63	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g01916	-		-	gmx:100784454	1019.22

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma07g01916	07	40402145	40405335	Gma15g00709	15	5821179	5824832	PCT
	Gma07g01916	07	40402145	40405335	Gma13g02119	13	36287919	36291623	PCT
	Gma15g00709	15	5821179	5824832	Gma07g01916	07	40402145	40405335	PCT
	Gma13g02119	13	36287919	36291623	Gma07g01916	07	40402145	40405335	PCT