Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01898 ATGTATGTAGCTTCCATGCGCAAGTCTTTCAAGGACTCCTTGAAAGTCCTTGAAGCTGATATCCAACACGCCAATACCCTGGCCTCAGATTTTCCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACCTGTTCCTTTTCTTGGTACAGTGGACAGATTGCCATCTTGCTGGAGCCCTTGGACTGTTAAGAATCCTAATTTACAAGGTCTATGTGGATGGGACAACCACCATGTCTACACATGAACGAAAAGCAAGTATTAGAGAATTCTATGCGGTCATTTATCCCTCTTTGTTGCAACTTGAAAAAGGTGTAACTGATACTGAGGATAAGAAGCAAAAGGCTGTGTGCATGGAGAGGTACCGTAGAAGAGATGATGAGGAGTATAGGCAGTCTTCTGACATAGACATTGAAAGAGAAGATGAATGTGGAATATGCATGGACATGAATAGTAAGATTGTGCTTCCCAACTGCAATCATGCCATGTGCCTGAAATGTTACCGAGAATGGCGAACAATATCACAATCATGCCCATTTTGCCGCGACAGTCTGAAGAGAGTGAACTCAGGTGATCTCTGGGTATTCACCGATAGAAGGGATGTGGTAGACATGGCAACAGTGACAAGGGAGAATCTCAGAAGGCTTTTCATGTACATAGATAAGTTGCCTCTGATTGTTCCAGACTCCCTTTTTGACACATATGACTCTCACATAAGAGTTGCAGTACTTGCTTCCCACTTCTGCTGCCAGAAGTATCCAGCCCTGTGTTAA 795 0.4403 MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDTEDKKQKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMDMNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHIRVAVLASHFCCQKYPALC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01898 264 PANTHER RING FINGER PROTEIN 41, 151 4 247 - -
Gma07g01898 264 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Gma07g01898 264 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Gma07g01898 264 SUPERFAMILY RING/U-box 139 193 - -
Gma07g01898 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 197 IPR013083 -
Gma07g01898 264 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Gma07g01898 264 SMART ring_2 151 188 IPR001841 -
Gma07g01898 264 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8-LIKE 4 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01898 Gma-Chr7 40239137 40242913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01898 K25840 - gmx:100777318 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01898 07 40239137 40242913 Gma15g00686 15 5649213 5652737 PCT
Gma07g01898 07 40239137 40242913 Gma13g02142 13 36476811 36480475 PCT
Gma15g00686 15 5649213 5652737 Gma07g01898 07 40239137 40242913 PCT
Gma13g02142 13 36476811 36480475 Gma07g01898 07 40239137 40242913 PCT