Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01882 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTGTTGGAGGCTCAGAATTTGGAACTTCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAGCAGCAACAACAACAACAAACTCAGCCGAATTCAGAGTCTTTGAAATGTCCAAGATGTGACTCTACCAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGCAATGTTCCAGTTGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAATCAATCACTCCAATTACAACATCTTCCACCACCACCACACCAATCACAACCGCCACTTCAACTTGCACTGCCACAGTCACAACCTCAATTGGCAACAACATGGATGCTATGTTGGGTTGTTATAGCCACATGACAATCCAAACTCCTCTTGCGGATGATCAGAAAAACATGTCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGCTCAACACAAGAGAATTAGAAGGCAAAGATTTTGGTATTGGTATCGGTAATAATGGTATCTTTCCTAGTTCAACTTTGGCTCTTCCTACTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAGCCTCAAGCAGATCTTTTGACACCAACCCTTGTTCAGTAGTGTCAACCTCTCTTAGATCCTCCAATGTTTATAACTATGGGGAGGATCAGTTTAAAGCAATAGAGGAACCAACCATCAATAGTACTACTGCTACTATAGTGCCTAGCACAGGTGGCACCAACAACACACATCATCCATGGGAGATAGCAGCAGCAACAAGTGGTGTTGGCTTGGGAACTTCTTCAAATTCAAACTATTGGAATTGGGAGGATTTTGATTCATTGGTTTCAACTGATCTAAAAGATCCCTGGGATGATTCAGATATCAAACCCTGA 999 0.4324 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQQQQQQQTQPNSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSITPITTSSTTTTPITTATSTCTATVTTSIGNNMDAMLGCYSHMTIQTPLADDQKNMSSSLYQALIRPPPLLLQQNLLNTRELEGKDFGIGIGNNGIFPSSTLALPTHQSQSLLFPFSASSRSFDTNPCSVVSTSLRSSNVYNYGEDQFKAIEEPTINSTTATIVPSTGGTNNTHHPWEIAAATSGVGLGTSSNSNYWNWEDFDSLVSTDLKDPWDDSDIKP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01882 332 MobiDBLite consensus disorder prediction 32 55 - -
Gma07g01882 332 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Gma07g01882 332 Pfam Dof domain, zinc finger 53 106 IPR003851 GO:0003677|GO:0006355
Gma07g01882 332 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 218 IPR045174 GO:0003700|GO:0006355
Gma07g01882 332 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Gma07g01882 332 PANTHER OS06G0284500 PROTEIN 37 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01882 Gma-Chr7 40091667 40092665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01882 42 201 C2C2-Dof Transcription Factor Family AT1G51700 40.741 3.93e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma07g01882 zf-Dof 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01882 - - gmx:100818111 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01882 07 40091667 40092665 Gma15g00674 15 5542663 5544509 PCT
Gma07g01882 07 40091667 40092665 Gma13g02153 13 36596023 36598110 PCT
Gma15g00674 15 5542663 5544509 Gma07g01882 07 40091667 40092665 PCT
Gma13g02153 13 36596023 36598110 Gma07g01882 07 40091667 40092665 PCT