Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01866 ATGGATAGCAGAGATTCATCATCGGGGTCTCAGCACCCACACCTTCCTCCAGGGTTTCGGTTCCACCCCACCGATGAAGAGCTCGTGGTTCACTACCTCAAGAGAAAAGCTGCTTCTGCACCCCTTCCCGTCGCCATCATCGCCGATGTTGATCTCTACAAGTTCGACCCTTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGGGCTAGGCCCAATAGAGCTGCTACTTCTGGGTATTGGAAGGCCACTGGAACTGACAAGCCTATATTAACAACATATGGGCACCACAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGTGGAAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCATGAGTATAGGCTTGTTGATGATTCCTTTAATTCAAGCTCAAAACCGCCTCCTCTGGTTCCTCATAACAAGAAAAATTCCCTGAGGCTGGACGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAACACCACCCTACCAAGGCCACCCATGATGGAGCATGAAGAGGAGCTTTCAATGGACAACATGCTACCAACGATGTCAACGTTGTCAATGGCTAACAACAAAATGCAAAACCCTAAACCTCCCTCGAGGAGCACGAGTTATGGTCCACTAGGACTTGAAAATGATGACAACTTCTTCGAGGGAGTCTTGGCCGTGGATCAAAGCATGCAAAATGGTTCTGATTCTCACATTTTCTCTCCAAACTCAAAGGGTGATAATAATAATAACAACAACAATAATGCTAGCAACTTTCCTATCAAACGTGCACTGATCACATCACAACTTTGGAACGAGACAGGGTCTCCGGGGTCTTCTTCTTCGTGCAAGCGATTTCATGGTGATCTTAATTGTGGATGCAGCAATGCTGAGGACAATAATGATTCCTTTATTTCCCTGCTAAGCCAGTTTCCTCAGAACGCAACTTTTCAGCCAAACGCGATTCATGGGTCCGTTGAGGATGATGGTGCGCCGAGGCAACAATTTCATCTTCATGGCATAAATTGGAACTGA 1089 0.4564 MDSRDSSSGSQHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTTYGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVDDSFNSSSKPPPLVPHNKKNSLRLDDWVLCRIYKKSNNTTLPRPPMMEHEEELSMDNMLPTMSTLSMANNKMQNPKPPSRSTSYGPLGLENDDNFFEGVLAVDQSMQNGSDSHIFSPNSKGDNNNNNNNNASNFPIKRALITSQLWNETGSPGSSSSCKRFHGDLNCGCSNAEDNNDSFISLLSQFPQNATFQPNAIHGSVEDDGAPRQQFHLHGINWN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01866 362 PANTHER NAC TRANSCRIPTION FACTOR 56 1 336 - -
Gma07g01866 362 MobiDBLite consensus disorder prediction 1 21 - -
Gma07g01866 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Gma07g01866 362 MobiDBLite consensus disorder prediction 251 276 - -
Gma07g01866 362 ProSiteProfiles NAC domain profile. 15 178 IPR003441 GO:0003677|GO:0006355
Gma07g01866 362 SUPERFAMILY NAC domain 10 178 IPR036093 GO:0003677|GO:0006355
Gma07g01866 362 Gene3D NAC domain 24 183 IPR036093 GO:0003677|GO:0006355
Gma07g01866 362 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01866 Gma-Chr7 39948616 39950391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01866 5 362 NAC Transcription Factor Family AT1G61110 50.829 2.85e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma07g01866 NAM 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01866 - - gmx:100797132 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01866 07 39948616 39950391 Gma15g00665 15 5466893 5468296 PCT
Gma07g01866 07 39948616 39950391 Gma13g02164 13 36674367 36675805 PCT
Gma15g00665 15 5466893 5468296 Gma07g01866 07 39948616 39950391 PCT
Gma13g02164 13 36674367 36675805 Gma07g01866 07 39948616 39950391 PCT