Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01865 ATGGATAACATTGTATTAAAGATGACTAGTTTATACACCTTGGTTCTTTTACTTTTACTTTTTCTATCTTATAGGCCTGCTCTTTCATTTTCTTCTAGACATAGGCAATATTGGGGTGGTGGGAGGATATTGAGCTCTGGTGATCATAATGGTGATCTTGTGACTAATttgcctggccagcctggggtgaatttccagcactatgctggatatgtcacagtcaatgaaaccaatggaagagcactcttttactggttctatgaggctatcaccaagccagaagagaaaccattggtgctttggcttaatggagGCCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAAGGCCTCAAATTTAATAACTTCTCTTGGAACAGAGAAGCCAACATGTTATTCTTGGAATCTCCTGTTGGAGTGGGCTTTTCATACTCAAATACAAGCAGTGACTATGACCAATTGGGAGATGAATTGACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTCCAAAAGTTTCCATCCTATAGAATTAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAATATGTACCAGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAATCCTGAAACATCTGATGCTGAGGACTGGATGGGTCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATCAAACAATCAAAACAAGTTGTGACTTTAACAGCACTGATCCATGGCGAAATAAAGATTGTAGCCAAGCTGTGGATGAAGTTCTCAAACAATACAATGAAATTGATATCTATAGTCTCTACACCTCTGTTTGCTTTGCCAGTACAGCAAGCTCAGACGATCAATCCATGCAAACTTCCATGAAGCGTTCATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCGTGCCTTGATGGCTATGCTAAAGCCTTTTATAATAAACCAGATGTTCAGAAGGCTCTTCATGCCAGCGATGGTCACAATCTAAAGAAATGGAGCATTTGCAATGACAAGATATTCAATGACTGGGCCGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTATAGTGGAGATACAGATGGTAGAGTACCAGTGCTGTCGACAAGGTACAGCTTAAGCCCTCTTGCGTTGCCTATCACTAAATCATGGAGGCCCTGGTACCATGACAATGAGGTTAGCGGGTGGTTTGAAGAATATGAGGGGCTTACATTTGCAACGTTTCGAGGAGCTGGCCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATAA 1461 0.3758 MDNIVLKMTSLYTLVLLLLLFLSYRPALSFSSRHRQYWGGGRILSSGDHNGDLVTNLPGQPGVNFQHYAGYVTVNETNGRALFYWFYEAITKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTSSDYDQLGDELTANDAYSFLHNWFQKFPSYRIRTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHQTIKTSCDFNSTDPWRNKDCSQAVDEVLKQYNEIDIYSLYTSVCFASTASSDDQSMQTSMKRSSKMMPRMLGGYDPCLDGYAKAFYNKPDVQKALHASDGHNLKKWSICNDKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSPLALPITKSWRPWYHDNEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01865 486 Gene3D alpha/beta hydrolase 49 307 IPR029058 -
Gma07g01865 486 Gene3D - 338 374 - -
Gma07g01865 486 Gene3D - 385 479 - -
Gma07g01865 486 SUPERFAMILY alpha/beta-Hydrolases 50 480 IPR029058 -
Gma07g01865 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Gma07g01865 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Gma07g01865 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Gma07g01865 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Gma07g01865 486 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Gma07g01865 486 PANTHER CARBOXYPEPTIDASE 11 483 - -
Gma07g01865 486 Pfam Serine carboxypeptidase 59 479 IPR001563 GO:0004185|GO:0006508
Gma07g01865 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 483 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01865 Gma-Chr7 39917024 39923740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01865 341 480 Calmodulin-binding Proteins AT2G22960 35.461 1.47e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01865 K16297 - gmx:100815993 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01865 07 39917024 39923740 Gma15g00663 15 5454334 5459001 PCT
Gma07g01865 07 39917024 39923740 Gma13g02166 13 36701089 36705512 PCT
Gma15g00663 15 5454334 5459001 Gma07g01865 07 39917024 39923740 PCT
Gma13g02166 13 36701089 36705512 Gma07g01865 07 39917024 39923740 PCT