Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01858 ATGGTGACGTGGAGCACCTGGCAGGAGCTTCTCCTCGGTGGAGCGGTTTCCCGGCACGGAATCCGAGATTGGACCGTCATTGCCGCCGAACTCAAGACCCGAACCGTTTCACCATGCATTTTCACACCCGAGGTCTGTAAAGCCAAATATGTAGAGTTGCAACAGCAGTATCCTGGGGGTTGCACGTCTTGGTTTGAGGAGCTTAAGAAGAAAAGAGTGGCAGAGCTTAAGAAAGATTTGGAGCTATCCGAGGAAGTAATTGGGTCCCTTGAGTCAAAGCTTGAAACCCTTCAGGCTGGGAGGGATGAGAAAAGAGATGATTGCCATGTTGACAATGGCTCGGCTGAACCAGAGTTACATGTTCCTTCTCAGAAATTGGATAGAGTCGACACTTCTGCAAAAGAGATGTCAAAGGATGGGTTATCTGCTGGGAGTTTCACACATGAAACCAAGACAAACTGGACTCATGAATGCCAGGTTCCGGCAACATCTTGTGAATATGTGAGGACCAAGCCTGAAGTTTCAGCGTCTACTGAACAGGAGAAAGTTTTAAATGTAGATAAGTCAACTCACACTGTATATGAAGGACAGGGAGGGTGTTTGAAAAAACCGAGAGGGAAGAGAAAGAGGAAGGATTGTGGCAGAAGTATTAATGAAGTAAGTGCAAGAGAAAGTGATTTTTCAGCTGATGTGTGTAAAGAAAGTTCTATCAGCAACTGTGGTGAGATTGTCAAATCTTCTGGTATGAATGAGGAGAATGCAAACTTGAAGAAGGCTGGAATTAAAGATTTGATGGAGGTCTTAGATTCTTTTTTGACAGTTCAAGGTGCTTCTGCCTTCTCTTATAAGCATGATAGCCAGAAGCGAGGAAAATACGAGCAATTGATCCGGCAGCACATGGACTTTGAGACCATAAAGTCAAGAATCTGCAACGGAACAATCAAGTCCGTGGTGGAACTTTTAAGAGACTTGCTACTACTGAGCAACAATGCTCTAGCATTCTACTCCAAGAACACTCGGGAATACAAAACTGCTCTACAACTTAGAGACCTTGTCATCAAAACATTGACAGAGAAACTGGAGTGTGCTAGCACATCACCTGTGTGTGATCCTTCTGCAAAAGTCAGAAGCACGTGTTTCAGCACATCGCCTATGCGTGATTCTTCAGTGAAAGTCAGAAGCATTTGTTCCACTTCGCTTGTGCATGATCCTTCAGTGCAAGTCAGAAGCATGCGCCCTGGTAATCGCAAGATTGTTGCAAAGGTAGCTGGTGGCAGCTGCTCTGCTGAAAGGGTCTCAGTTGGAGTTAAGAAAGCTAAAAAAGTGGATTCTCTACCAGCTGAAAGGGTCTCGGCTGCAGTTAAGAAAGCTAACAAAGTCGAATCTCCACCTTCAGTGGAATCCGTCAAGAAAGCTTTTGGTGGTAGAGCAAAAAAGGTTGGACGTGAAAGTGCAGGTAAGAGAAATGCAACACCAAGGAATGAAAGGAAAAGAAGGAGAGCAAAGTGA 1509 0.4493 MVTWSTWQELLLGGAVSRHGIRDWTVIAAELKTRTVSPCIFTPEVCKAKYVELQQQYPGGCTSWFEELKKKRVAELKKDLELSEEVIGSLESKLETLQAGRDEKRDDCHVDNGSAEPELHVPSQKLDRVDTSAKEMSKDGLSAGSFTHETKTNWTHECQVPATSCEYVRTKPEVSASTEQEKVLNVDKSTHTVYEGQGGCLKKPRGKRKRKDCGRSINEVSARESDFSADVCKESSISNCGEIVKSSGMNEENANLKKAGIKDLMEVLDSFLTVQGASAFSYKHDSQKRGKYEQLIRQHMDFETIKSRICNGTIKSVVELLRDLLLLSNNALAFYSKNTREYKTALQLRDLVIKTLTEKLECASTSPVCDPSAKVRSTCFSTSPMRDSSVKVRSICSTSLVHDPSVQVRSMRPGNRKIVAKVAGGSCSAERVSVGVKKAKKVDSLPAERVSAAVKKANKVESPPSVESVKKAFGGRAKKVGRESAGKRNATPRNERKRRRAK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01858 502 Coils Coil 73 93 - -
Gma07g01858 502 Gene3D - 250 361 IPR036427 GO:0005515
Gma07g01858 502 MobiDBLite consensus disorder prediction 455 502 - -
Gma07g01858 502 MobiDBLite consensus disorder prediction 98 121 - -
Gma07g01858 502 MobiDBLite consensus disorder prediction 195 214 - -
Gma07g01858 502 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 502 - -
Gma07g01858 502 CDD SANT 3 53 IPR001005 -
Gma07g01858 502 ProSiteProfiles Bromodomain profile. 272 342 IPR001487 GO:0005515
Gma07g01858 502 Pfam Bromodomain 265 345 IPR001487 GO:0005515
Gma07g01858 502 SUPERFAMILY Bromodomain 260 362 IPR036427 GO:0005515
Gma07g01858 502 MobiDBLite consensus disorder prediction 98 114 - -
Gma07g01858 502 MobiDBLite consensus disorder prediction 472 491 - -
Gma07g01858 502 PANTHER BROMODOMAIN PROTEIN 1 502 - -
Gma07g01858 502 SMART bromo_6 257 361 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01858 Gma-Chr7 39811343 39816011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01858 - - gmx:100793085 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01858 07 39811343 39816011 Gma15g00653 15 5356998 5362978 PCT
Gma07g01858 07 39811343 39816011 Gma13g02176 13 36786956 36792842 PCT
Gma15g00653 15 5356998 5362978 Gma07g01858 07 39811343 39816011 PCT
Gma13g02176 13 36786956 36792842 Gma07g01858 07 39811343 39816011 PCT