Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01841 ATGCGGAGTTTCACTTTCTTTGATCGAGTTTCTAGAGCTTTCCGCGATCATGGGTCCAACTTCAAGCTTGTACTCCTCTGCACCACCGTAAGTGGTGGAGGGATTGTAGCTTACGGAGAGGCTGTTGCCGCATCTGAAGCAGCGGCGGCGGCGACGGAGAAGAAAAAGGTGGTGGTGCTGGGAACTGGGTGGGCTGGCACGAGTTTCTTGAGGAACCTGGACAACCCCAAATATGAGGTTCATGTGGTCTCCCCTCGCAATTACTTTGCATTCACTCCTTTGCTGCCTAGTGTTACCTGTGGCACCGTGGAAGCTCGCAGCATTGTCGAACCCGTCCGCAATATTTTCAGGAAGAAAAAGATGGACATGCAATTTAGTGAAGCAGAATGTCTCAAGATTGACGCAGCACACAGGAAGGTTTACTGTCGATCTAATATAAGTAATAATTTGAACGAGAAAGAAGAATTTGTGGTGGACTATGACTACCTAATCATAGCCGTGGGAGCAAATGTCAACACATTTAATACTCCCGGAGTGATGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCACAAAAGATTAGAAGAACCGTTATTGACTGCTTTGAGAGAGCAAGTTTGCCTAGTGTAAGTGAAGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCTCACTACATGACTATGTCACTGAGGATTTGGTCAACATATATCCTGGGATAAAAGATCTAGTTAAAATTACCCTTCTGGAGGCTGGAGATCATATTTTGAGCATGTTTGATAAAAGAATTACTGCTTTTGCTGAAGAGAAGTTCGGAAGAGATGGTATTGATGTGAAAACTGGATCCATGGTTGTGAAGGTATCCGAGAAAGAAATTTCTACTAAAGAAATGAAAAATGGAGGAGCAATTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATAAGAGATTTTATGTCACAAATTGGTCAGACTAACAGACGTGCCATAGCTACTGATGAATGGTTGAGAGTTGAAGCAACTAACAACGTGTATGCACTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATCGCAGCAATATTTAAGAAGGCTGACAAAGACAATTCAGGAACTCTTACTGTCAAAGAATTTCAGGAGGTATTGGATGATATCTGTGAGAGATACCCTCAGGTAGAGCTATATCTAAAGAGTCAACAGATGCACAACATTGCTGATTTGTTGAAAGGGTCCAAGGAAGATGTTGAAAAAGAATCTATTGAACTGAACATCGAAGAACTAAAAACCGTACTCTCTAAAGTGGATTCCCAGATGAAATTTCTTCCTGCTACAGCGCAGGTTGCATCTCAGCAAGGCACCTACCTGGCCAAGTGCTTTAATCGGATGGAAGAGTGTGAGAAAAACCCAGAGGGTCCCATCAGGTTCAGGGGAGAAGGGCGCCATCGCTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTCTAGGAGGAGAGCAAACAGCTGCACAGCTTCCTGGGGATTGGGTTTCAATTGGACACAGCTCTCAATGGCTGTGGTATTCTGTCTATGCAAGTAAACAAGTCAGCTGGCGCACAAGGGCGTTAGTAGTATCAGACTGGACAAGACGCTTTATTTTTGGGAGGGATTCAAGTCAAATCTGA 1743 0.436 MRSFTFFDRVSRAFRDHGSNFKLVLLCTTVSGGGIVAYGEAVAASEAAAAATEKKKVVVLGTGWAGTSFLRNLDNPKYEVHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKKMDMQFSEAECLKIDAAHRKVYCRSNISNNLNEKEEFVVDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQKIRRTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDYVTEDLVNIYPGIKDLVKITLLEAGDHILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSEKEISTKEMKNGGAITTIPYGMAVWSTGIGTRPFIRDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVLDDICERYPQVELYLKSQQMHNIADLLKGSKEDVEKESIELNIEELKTVLSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01841 580 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Gma07g01841 580 Coils Coil 442 462 - -
Gma07g01841 580 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Gma07g01841 580 PANTHER NADH DEHYDROGENASE 3 580 IPR045024 GO:0003954|GO:0006116
Gma07g01841 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Gma07g01841 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Gma07g01841 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Gma07g01841 580 SMART efh_1 382 410 IPR002048 GO:0005509
Gma07g01841 580 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Gma07g01841 580 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
Gma07g01841 580 Gene3D - 424 579 - -
Gma07g01841 580 Gene3D - 45 406 - -
Gma07g01841 580 SUPERFAMILY EF-hand 333 467 IPR011992 -
Gma07g01841 580 SUPERFAMILY FAD/NAD(P)-binding domain 216 375 IPR036188 -
Gma07g01841 580 PANTHER NAD(P)H DEHYDROGENASE B2 3 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01841 Gma-Chr7 39646080 39651534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01841 1 580 EF-hand Containing Proteins AT4G05020 69.823 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01841 K03885 - gmx:100809915 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01841 07 39646080 39651534 Gma08g00566 08 4620485 4626845 GST
Gma07g01841 07 39646080 39651534 Gma15g00635 15 5203986 5208629 PCT
Gma07g01841 07 39646080 39651534 Gma13g02196 13 36948509 36953862 PCT
Gma15g00635 15 5203986 5208629 Gma07g01841 07 39646080 39651534 PCT
Gma13g02196 13 36948509 36953862 Gma07g01841 07 39646080 39651534 PCT