Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01839 ATGGGTGACGAAGAAGTATTCGCCGGAGCTTCGGGTCTCCGGCGAGCGGTGGAGCTAATCTTTTCCGTGCTCTCACTCTCGCACTCGATTCGCGTCTTCGCCGGAAAATGGCAGCTGATTCGGGCCAAGCTGGAGGAGCTCCACGGCGGTCTAATCGCCGCCGAGAACTTCGACTCCGGCGACAGCCCGTCGCTGTCGAGGCTGGCGGAAGCGGTGGCGGTCACCTCGACGGAGTGCCGCGATCTTTGCCGGCGCTGCGTGGACGTGTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGACGCGCACGCGAAGAAGCTCAGTGAGATATACAAGACTGGAATTTTAACAAATGGGTTCGCGTTGGTGGTTTCAAAACCGAACCTTGGCGCTTCAAAAGAGGACATGAGGTTCTACGTGAGGGACTTAACGACGAGGATGAAGGTTGGGGATTTGGGTATGAAGCGGCAAGCGCTGAAGAATCTTCTGGAAGTTGTGGTGGAGGATGAGAAGTACGTGAAGGTGATTGTGGATGTTGGTGACGTGGTTCATTTGTTGGTGGGGTTTTTGGGGTCTAACGAGGTGGAGATTCAGGAGGAGAGTGCTAAGGTTGTTTCTGTTGTTGCGGGGTTTGATTCCTACAAAGGGGTTTTGGTTTGTGCGGGTGTGATTGCTCCTTTGGTTAAGGTTTTGGATTGTGGAAGTGTTTTAGGGAAGATTGCGGCTGCTAGGTGTTTGGTGAAGTTAACTGAGAATTCGGATAATGCTTGGTGTGTTTCTGCTCATGGAGGGGTTAGTGTGTTGTTGAAGATATGTGGTGGTGGTGATTGTGGTGGTGATTTGGTTGGGCCTGCTTGTGGGGTGTTGAGGAATCTCGTTGGTGTTGAGGAGATTAAGAGGTTTATGGTTGATGAGGGTGCTGTGGTAACATTCATTAGGCTTGTGAGGTCCAAGGAGGAAGCGATTCAGGTGAATTCGATAGGGTTTATTTTGAGTATTGCTTCTGGGGATGAATTGGTTAGGCAGATGGTGATCAAAGAGGGAGGGATTCGCGCTTTGTTGCGTGTTTTGGATCCTAAGTGGTCTTATTCTTGTAAAACCAGGGAGGTGACAATGAGGGCTGTTGAGGATTTGTGTTTTTGTTCGCCTAGTTCTGTTGGGGTGTTGATGAATTGTGGTTTTGTGGATCAGTTGATATATTATGTTAGAAACGGCGAGGTTTCGATTCAGGAGTTGGCATTGAAGGTGGCGTTTAGGCTGTGTGGAACATCGGAGGAGGCCAAGAAAGCAATGGGGGATGCTGGGTTTATGCCGGAGTTTGTTAAGTTTCTCAATGCAAAGTCATTCGAGGTTCGCGAAATGGCGGCCGAGGCACTCTCTGGCATGGTTATAGTGCCTAGAAATAGAAAGAGGTTTGTGCAGGATGACCATAACATAGCCCTTCTTCTGCAGTTGCTTGATCCAGAGGAGGGGAATTCAGGTAACAAAAAGTTCTTAATCTCTATATTGATGTCCTTAACGAGTTGCACTAGTGGGAGGAAAAAGATTGTTAGTTCCGGATATGCAAAAAACATAGAAAAACTTGCGGATGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTCAAGAAGCTATCCACAAACCGGTTCCGCAGCATGTTGAGTGGAATCTGGCACTCGTGA 1704 0.4924 MGDEEVFAGASGLRRAVELIFSVLSLSHSIRVFAGKWQLIRAKLEELHGGLIAAENFDSGDSPSLSRLAEAVAVTSTECRDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHAKKLSEIYKTGILTNGFALVVSKPNLGASKEDMRFYVRDLTTRMKVGDLGMKRQALKNLLEVVVEDEKYVKVIVDVGDVVHLLVGFLGSNEVEIQEESAKVVSVVAGFDSYKGVLVCAGVIAPLVKVLDCGSVLGKIAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGGGDCGGDLVGPACGVLRNLVGVEEIKRFMVDEGAVVTFIRLVRSKEEAIQVNSIGFILSIASGDELVRQMVIKEGGIRALLRVLDPKWSYSCKTREVTMRAVEDLCFCSPSSVGVLMNCGFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVREMAAEALSGMVIVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCTSGRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSMLSGIWHS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01839 567 Gene3D - 147 556 IPR011989 -
Gma07g01839 567 Pfam Armadillo/beta-catenin-like repeat 433 468 IPR000225 GO:0005515
Gma07g01839 567 SUPERFAMILY ARM repeat 154 547 IPR016024 -
Gma07g01839 567 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
Gma07g01839 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 567 - -
Gma07g01839 567 SMART arm_5 345 388 IPR000225 GO:0005515
Gma07g01839 567 SMART arm_5 432 472 IPR000225 GO:0005515
Gma07g01839 567 SMART arm_5 177 218 IPR000225 GO:0005515
Gma07g01839 567 SMART arm_5 219 259 IPR000225 GO:0005515
Gma07g01839 567 SMART arm_5 260 302 IPR000225 GO:0005515
Gma07g01839 567 SMART arm_5 303 343 IPR000225 GO:0005515
Gma07g01839 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01839 Gma-Chr7 39613845 39615982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01839 159 362 U-box Gene Family AT2G23140 25.000 4.50e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01839 - - gmx:100809382 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01839 07 39613845 39615982 Gma08g00568 08 4656167 4658049 GST
Gma07g01839 07 39613845 39615982 Gma15g00634 15 5192366 5194057 PCT
Gma07g01839 07 39613845 39615982 Gma13g02197 13 36962148 36963995 PCT
Gma15g00634 15 5192366 5194057 Gma07g01839 07 39613845 39615982 PCT
Gma13g02197 13 36962148 36963995 Gma07g01839 07 39613845 39615982 PCT