Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01836 atgggtagatcaccttgttgtaacaaaaatggcctcaagaaaggaccatggacaccagaagaagaccaaaaacttattgattacattcagaaacatgggtacggcaattggagagtactcccaaagaatgctgGTTTGCAAAGGTGTGGAAAGAGTTGCCGTCTCCGTTGGACAAACTATCTCCGACCAGATATAAAGCGAGGTCAATTCACTTTTGAAGAGGAAGAGACTATAATACAGCTACATAGCATTCTTGGCAACAAGTGGTCAGCTATTGCTTCTCGCTTACCCGGAAGAACAGACAATGAAATCAAGAATTACTGGAACACCCACATTAGAAAAAGGCTTCTAAGGATGGGAATTGACCCTGTGACACATAGGCCAAGGCTTGATCTTTTGGACCTATCTTCCATCTTAAGTTCAACCCTCTACGGTTCAACACAAATGAACATCCAAAGACTTCTTGGCACTAACACAGTGGTGAACCCTGAGCTTCTAAAGTTGGCCTCGTCACCCTTCCCCTCTCTGCAGCAACGCCAACACCAAAACATGTGTGCACAAAATTGTGAAGAGAACCATCTCTGTGACCCCCAAATTCAGAACCAAATCCCTCAGGACTTGGCTCAAGAAGCATTGCCTTTCAATCATACACAGTTTGTTGAATCCAATATGAATATTATTCCATACCCTTCAATTTTCCAAGACTCTAGCTTCCAACAACATTCTCAACCAAGTGATTTGCATTGCAACGGAATTGATCATACAAGTTATGTTCCTCAATTACCAAACTATGATTACCCTCCAATTTCTGAACTCTCAACTTATAACAATTCCTATAACAACAACCAGAACTTCAGCTACACTTCAGTTCTCTCAACGCCTTCTTCAAGTCCCACACCGTTGAATTCGAACTCGACGTATGTCAATGGGTGCAGCAGCACTGAGGATGAGACAGAAAGCTATGTCAGTAGCAACAACTTGTTGAGATTTGAAATCCCAGATATGCTATGCGTATGA 1017 0.3677 MGRSPCCNKNGLKKGPWTPEEDQKLIDYIQKHGYGNWRVLPKNAGLQRCGKSCRLRWTNYLRPDIKRGQFTFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHRPRLDLLDLSSILSSTLYGSTQMNIQRLLGTNTVVNPELLKLASSPFPSLQQRQHQNMCAQNCEENHLCDPQIQNQIPQDLAQEALPFNHTQFVESNMNIIPYPSIFQDSSFQQHSQPSDLHCNGIDHTSYVPQLPNYDYPPISELSTYNNSYNNNQNFSYTSVLSTPSSSPTPLNSNSTYVNGCSSTEDETESYVSSNNLLRFEIPDMLCV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01836 338 CDD SANT 16 61 IPR001005 -
Gma07g01836 338 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma07g01836 338 CDD SANT 70 112 IPR001005 -
Gma07g01836 338 Gene3D - 69 116 - -
Gma07g01836 338 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma07g01836 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma07g01836 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 336 - -
Gma07g01836 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma07g01836 338 SMART sant 66 114 IPR001005 -
Gma07g01836 338 SMART sant 13 63 IPR001005 -
Gma07g01836 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma07g01836 338 PANTHER TRANSCRIPTION FACTOR MYB41 1 336 - -
Gma07g01836 338 Gene3D - 13 66 - -
Gma07g01836 338 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma07g01836 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01836 Gma-Chr7 39557957 39559711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01836 1 338 MYB Transcription Factor Family AT4G21440 52.044 1.08e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma07g01836 Myb_DNA-binding 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01836 K09422 - gmx:100808310 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01836 07 39557957 39559711 Gma08g00571 08 4707895 4709631 GST
Gma07g01836 07 39557957 39559711 Gma15g00630 15 5164453 5166184 PCT
Gma07g01836 07 39557957 39559711 Gma13g02202 13 36986511 36988317 PCT
Gma15g00630 15 5164453 5166184 Gma07g01836 07 39557957 39559711 PCT
Gma13g02202 13 36986511 36988317 Gma07g01836 07 39557957 39559711 PCT