Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01830 ATGACCACCAAACGCAAACATGCAAATTTTCTGCTTCCTTTATTCTTCTTCTTCTTCTTCTGTTCTCACACTTTGTTCTCTCATGCAGCCGATTCCATCACAGGAGATACAGTAATCAGAGACAACGATGGTGGTGATACTTTGGTGTCCAAAGACCTCACCTTTGAAATGGGTTTCTTCAGTTTCGATAACTCTTCAAGATACGTTGGGATTTGGTACCACGAGATTCCGGTTAAAACATTCATATGGGTTGCAAACAGAGAAAAACCCATCAAAGGAAGAGAAGGTTTGATCCAAATCAAAACTGACGGCAACTTGGTTGTCCTCGATGGAGAGAGAAACGAGGTGTGGTCAACAAACATGTCAATTCCAAGGAACAACACAAAAGCTGTTCTTCGTGATGACGGCAACCTTGTTCTTTCGGAACACGACAAGGATGTGTGGCAAAGCTTTGAGGACCCAGTTGATACATTTGTGCCGGGTATGGCACTTCCAGTTAGTGCTGGAACGAGCATGTTCAGGTCGTGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCAATGAAGGTTGACTCTGACGGGTCAACAAAACAGATTTTGATTTTGGAGGGAGAGAAAAGAAGAAGGTGGAGAACTGGGTATTGGGATGGTAGAGTGTTCACTGGTGTCTCCGATGTGACAGGAAGCTCTCTATTTGGTTTTGGAGTAACCACAAACGTTGAAGGAGAAGAATACTTTACATACAAATGGAATAGCCCTGAGAAGGTGAGGTTTCAGATAACTTGGGATGGGTTTGAGAAGAAGTTCGTGTGGGATGAAGATGGGAAACAATGGAATAGGACACAATTTGAGCCTTTTAATGACTGTGAGCATTATAACTTTTGTGGCAGTTTTGCAGTGTGTGATATGGGTAACTCTCCTGTTTGTAGTTGCATGCAAGGGTTTCAGCCAGTGCATTGGGAGGAGTGGAATAATAGGAATTGGTCAAGGGGGTGTGGGAGGAAGACTCCACTAAAGGCTGAGACTGAGAGAGCTGCTAATAGTAGTTCTTCTGGAGCTGAGGTTAGTGTTGGAGAAGATGGTTTCTTGGAGCAAAGGTGTACCAAGTTGCCGGATTTTGCACGGTTGGAGAATTTTGTTGGTTATGCGGATTGTCAGAGCTATTGTCTGCAGAATAGTTCTTGCACTGCTTATTCATATACTATTGGAATTGGGTGCATGATTTGGTATGGGGAGTTAGTCGATGTTCAACACACTAAAAATAATCTTGGAAGTTTACTCAACATCCGTCTTGCTGATGCTGGTTTAGGCGAAGGGGAGAAAAAGACCAAAATTTGGATAATATTAGCTGTTGTGGTGGGGTTGATCTGCCTTGGAATCGTTATATTTCTGATATGGAGGTTTAAGAGAAAACCTAAAGCAATTTCCTCAGCTTCTGGTTACAACAACAATAGCGAAATACCAGTCTTTGATCTAACGAGAAGTACAGGCTTATCAGAAATTTCAGGTGAGTTAGGCTTGGAAGGGAATCAACTAAGTGGAGCAGAACTTCcattgttcaattttagctacattctagcagcaacaaacaatttctcagacgaaaataagcttgggcaagggggatttggtcctgtctacaaggggaagtttccagggggagaggaagtagctgtcaagaggctttcaagaaagtctagccaaggtttagaggagttcaagaatgaaatggtgctaatagccaaactgcaacatagaaatctggttagactattaggatgttgcattcaaggggaagaaaagattctggtatacgagtacttgccaaacaaaagcttggactgctttctatttgatccagtgaagcagacacaactagactgggcaagacgctttgaaataattgagggcattgcaagagggctactttatctgcaccaggattcaagacttagaataattcatcgcgatctaaaagcaagcaacattttgttggatgaaagcatgaatccaaaaatttcagactttggcttggccagaatatttgggggaaaccaaaatgaagccaacacaaacagagtggttggtacatatggttatatgtccccagaatatgcaatggaaggtctgttttcaattaaatctgacgtctatagttttggcgtattgctacttgagattatgagtggccgcaagaacactagctttcgtgacacagaagactcaagtcttataggatatGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTGTTGATCCTTCCGTTCGAGATTCAATTCCAGAGAGtaaagcgttgaggttcatacacatagggatgttatgcgtgcaagattcagcatctcgtagaccaaacatgtcatctgtgttgttgatgctgggaagtgaagccatagcacttcctttgcctaagcaacctttgcttactacttccatgaggaaacttgatgatggagaatcttatagcgaaggccttgatgtgtcaaatgatgtcacagttacaatggtgacagggagatag 2550 0.2761 MTTKRKHANFLLPLFFFFFFCSHTLFSHAADSITGDTVIRDNDGGDTLVSKDLTFEMGFFSFDNSSRYVGIWYHEIPVKTFIWVANREKPIKGREGLIQIKTDGNLVVLDGERNEVWSTNMSIPRNNTKAVLRDDGNLVLSEHDKDVWQSFEDPVDTFVPGMALPVSAGTSMFRSWKSATDPSPGNYSMKVDSDGSTKQILILEGEKRRRWRTGYWDGRVFTGVSDVTGSSLFGFGVTTNVEGEEYFTYKWNSPEKVRFQITWDGFEKKFVWDEDGKQWNRTQFEPFNDCEHYNFCGSFAVCDMGNSPVCSCMQGFQPVHWEEWNNRNWSRGCGRKTPLKAETERAANSSSSGAEVSVGEDGFLEQRCTKLPDFARLENFVGYADCQSYCLQNSSCTAYSYTIGIGCMIWYGELVDVQHTKNNLGSLLNIRLADAGLGEGEKKTKIWIILAVVVGLICLGIVIFLIWRFKRKPKAISSASGYNNNSEIPVFDLTRSTGLSEISGELGLEGNQLSGAELPLFNFSYILAATNNFSDENKLGQGGFGPVYKGKFPGGEEVAVKRLSRKSSQGLEEFKNEMVLIAKLQHRNLVRLLGCCIQGEEKILVYEYLPNKSLDCFLFDPVKQTQLDWARRFEIIEGIARGLLYLHQDSRLRIIHRDLKASNILLDESMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIMSGRKNTSFRDTEDSSLIGYAWHLWSEQRVMELVDPSVRDSIPESKALRFIHIGMLCVQDSASRRPNMSSVLLMLGSEAIALPLPKQPLLTTSMRKLDDGESYSEGLDVSNDVTVTMVTGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01830 849 Gene3D Phosphorylase Kinase; domain 1 505 608 - -
Gma07g01830 849 SMART blect_4 39 154 IPR001480 -
Gma07g01830 849 Gene3D - 26 151 IPR036426 -
Gma07g01830 849 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 849 - -
Gma07g01830 849 CDD PAN_AP_plant 360 433 - -
Gma07g01830 849 SMART ntp_6 358 432 IPR003609 -
Gma07g01830 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Gma07g01830 849 Gene3D Transferase(Phosphotransferase) domain 1 609 809 - -
Gma07g01830 849 SUPERFAMILY Protein kinase-like (PK-like) 518 824 IPR011009 -
Gma07g01830 849 CDD STKc_IRAK 539 803 - -
Gma07g01830 849 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Gma07g01830 849 Pfam PAN-like domain 359 417 IPR003609 -
Gma07g01830 849 Pfam D-mannose binding lectin 80 177 IPR001480 -
Gma07g01830 849 ProSiteProfiles PAN/Apple domain profile. 358 433 IPR003609 -
Gma07g01830 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 216 IPR036426 -
Gma07g01830 849 SMART serkin_6 533 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01830 849 CDD B_lectin 44 154 IPR001480 -
Gma07g01830 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 849 - -
Gma07g01830 849 Pfam Protein tyrosine and serine/threonine kinase 536 800 IPR001245 GO:0004672|GO:0006468
Gma07g01830 849 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01830 849 ProSiteProfiles Bulb-type lectin domain profile. 33 153 IPR001480 -
Gma07g01830 849 PIRSF SRK 2 849 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01830 Gma-Chr7 39494503 39498948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01830 521 844 Receptor kinase-like Gene Family AT4G11530 60.542 1.74e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma07g01830 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01830 - - gmx:100786721 1707.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01830 07 39494503 39498948 Gma08g00576 08 4756015 4761037 GST
Gma07g01830 07 39494503 39498948 Gma13g02216 13 37094802 37098456 PCT
Gma15g00616 15 5045288 5064638 Gma07g01830 07 39494503 39498948 PCT
Gma13g02213 13 37075272 37079151 Gma07g01830 07 39494503 39498948 PCT