Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01827 ATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGTGAAAACTGGTGGAGTAGTACCACTATTGATTCAACAAGAAGTACTGTGTTGTTCCCTCTAAGTTCATCATCATCATCATCATCTATATCTTCTTCTCCTTGTTCCGTGGCAGCTAATAATTATGATGCAGGAAACTATAGCACTAGGGGAACTAGTGACATGGATTTGAAGGCAACAAAGTGTTGTGCTGAAGAGACTAATAACAGTTTGGTTTCTGACACTACTTACCTGGGTTTTGTTGATGCACACAAGCCACATAAGAGTGAATCAGCAGCTAGTGGAAGTGGTGGCATGTTGACCGATTCCACCTTGCAGATGATGGGTTTTGGCCTCACATCATCATCAGAGAATTGGAATCAGCCTCTATTATTTCGATGTAATGGAAGGGCAGAGAGCAATTTCCACTCCTTGATTCAGGAAGAAACGGGAATAGATTCTTCTAATTCACAAATCCATAGGGATTGGATCCCAAAGAGCTTCTCCTCTGACGGTGGCAAACAACAAATTGATGATAATAATTTCAAGCCATTATTATTGAACCAACAAGAATTTTCATTAGATGACCATAGTCTAAGTTCTTTAACCACCGCTGGGTTATCATCAAACCGTGGATTCCCCAATGGATCAGCCTCATCATATGGTAACCCTTCAACGTTGCAAAGTTTATATGACCCTAATTATAATCCTCATCCACAACACTCACTTTTCACCAACCGTCCGATGTCCTATTCATCAAAAGCATGTTATGGGACACCATGCACTGAACTGCCAACATGGTCTAAAGCTTCCACTTTTTTTAAGCCCACAACCACAACAATTGCAAAGCAGCAACACCCTAATATTGGACTTCACTTTTCAAACAACACTCCTTTCTGGAATGCTTCCGCCGAGGCACTTCACGACATAAGAGTAGGTACCTTTGCTTCAACACAATCACAATATCAAAGGCCAACCTTTGATGATGAAGAGAAACCCAATTTCccaattactctattaaacaggCTCAATAGTGAAGAAATTCTAGAGTCGGCATCAATGGCTAAGAAAAATGTTTGTGAACCAGCATTAAAGAGGCCAAGAATTGAAACTCCATCTCCATTACCAACTTTCAAGGTTCGGAAAGAGAAGCTAGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATTAAGTTCCTTCATGATCAAGTCAATGTTTTGAGTACTTCATATATGAAAAATGGAGCTCCCACTCAACAGCAGCAGGGCTGTGATGATCTGAAAGACTCAGAAGGACCACAACAAGATTTAAAAAGCAAAGGGCTGTGTCTGGTACCGATTTCAAGCACATTTCCAGTGGCAACAGGAGCCACTAGTGCTGATCAATTGTGGACGCCTACATTCAGAGGCGCACTCTTAAGGTAG 1488 0.416 MAEEFQARICGENWWSSTTIDSTRSTVLFPLSSSSSSSSISSSPCSVAANNYDAGNYSTRGTSDMDLKATKCCAEETNNSLVSDTTYLGFVDAHKPHKSESAASGSGGMLTDSTLQMMGFGLTSSSENWNQPLLFRCNGRAESNFHSLIQEETGIDSSNSQIHRDWIPKSFSSDGGKQQIDDNNFKPLLLNQQEFSLDDHSLSSLTTAGLSSNRGFPNGSASSYGNPSTLQSLYDPNYNPHPQHSLFTNRPMSYSSKACYGTPCTELPTWSKASTFFKPTTTTIAKQQHPNIGLHFSNNTPFWNASAEALHDIRVGTFASTQSQYQRPTFDDEEKPNFPITLLNRLNSEEILESASMAKKNVCEPALKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGAPTQQQQGCDDLKDSEGPQQDLKSKGLCLVPISSTFPVATGATSADQLWTPTFRGALLR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01827 495 CDD bHLH_AtbHLH_like 378 429 IPR045239 -
Gma07g01827 495 Gene3D - 382 444 IPR036638 GO:0046983
Gma07g01827 495 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 482 - -
Gma07g01827 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 382 436 IPR036638 GO:0046983
Gma07g01827 495 MobiDBLite consensus disorder prediction 437 456 - -
Gma07g01827 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 372 421 IPR011598 GO:0046983
Gma07g01827 495 PANTHER TRANSCRIPTION FACTOR BHLH123 79 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01827 Gma-Chr7 39436647 39439924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01827 296 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 54.369 1.77e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01827 - - gmx:100784084 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01827 07 39436647 39439924 Gma08g00583 08 4823513 4827259 GST
Gma07g01827 07 39436647 39439924 Gma15g00609 15 4984799 4988153 PCT
Gma07g01827 07 39436647 39439924 Gma13g02224 13 37158649 37161732 PCT
Gma15g00609 15 4984799 4988153 Gma07g01827 07 39436647 39439924 PCT
Gma13g02224 13 37158649 37161732 Gma07g01827 07 39436647 39439924 PCT