Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01825 ATGTCTCTAGATGAGTTTTCTTTTAATGCTGAAAATGGTAGCAACAGGGAAAGGATGAGGAGGAAAAACTATGACTATGACACACAAGTGTTCAAATCCAAGAACCTTGAGGTGGAAAGGAGAAGGAGGGAGAAGCTCAGTACCAGGATTTTGCTGCTGCGGTCTTTAGTACCCATCATCACAATGCAACAACCACTTGAACTTCACTTAATGAACAAAGCAACCATTGTTGAGGATGCCATCACCTACATCGAAACCCAGCAAAACATAGTCCAGAGTCTCAGCTATGAGCTTCATGAAATGGAAGCAACATCAGAGGAAATAAAACCAAAGAAAGAAGAAATTGATGCTGCAGAAGAGATGAACAAATTGGGGATAGTACAGGAAGAGAGGTCTAGGCGACAAAAATTGATGGGAACAAACTGTGGGTCAAGATGA 438 0.4155 MSLDEFSFNAENGSNRERMRRKNYDYDTQVFKSKNLEVERRRREKLSTRILLLRSLVPIITMQQPLELHLMNKATIVEDAITYIETQQNIVQSLSYELHEMEATSEEIKPKKEEIDAAEEMNKLGIVQEERSRRQKLMGTNCGSR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01825 145 Pfam Helix-loop-helix DNA-binding domain 34 88 IPR011598 GO:0046983
Gma07g01825 145 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 104 IPR036638 GO:0046983
Gma07g01825 145 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 87 IPR011598 GO:0046983
Gma07g01825 145 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 130 - -
Gma07g01825 145 Gene3D - 32 122 IPR036638 GO:0046983
Gma07g01825 145 PANTHER TRANSCRIPTION FACTOR DYT1 3 130 - -
Gma07g01825 145 SMART finulus 36 93 IPR011598 GO:0046983
Gma07g01825 145 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01825 Gma-Chr7 39418728 39419375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01825 31 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 52.381 2.25e-22 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g01825 HLH 7.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01825 - - vun:114186874 143.28