Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01800 ATGGAGATTTCATCCATCAGAGGGTTACCTGATGATATGGAACAGGAAATAATGGAGGACGCTACCTTTCTCCATCAGTGGCACCTGAGTTCTATTGATGACCCTAACTTACTACCAATAGCTGCTGCTTTTGGAGAAACATTACAACATCATGCATTCAGTACTTATCCAAACTTCAACCCCAAAACTTCCATGGAAACTACACTTGCTGACGATGAAAGAGGCACAAAACACCACAGAAACATCAGCTTGAATCCCAATAGCAAAAGTGCTCAGACATCATCAGAGACACAATTTGTCTCTTTCCCAAATCTTTTCTCATTTGTTGATTCCAATCACACAACTCCTCCACCTGACACTATCTCTCAAGGAACCTTGGGGAATCATAATAACTATGTCTTCAAGGCATGCCAAGAAGCCAAAAAGACTGGGAAACGTTATAAACATTCTCAACCTCAAGACCACATCATAGCTGAAAGGAAGCGGCGAGAGAAGCTCAGCCAGCGGTTCATTGCTTTATCTGCCCTTGTTCCTGGACTACAGAAGACGGACAAAGCTTCTGTTCTTGGAGATGCTATCAAATACTTGAAGCAATTGCAGGAGAAAGTAAACGCTCTTGAGGAGGAACAAAACATGAAGAAAAATGTGGAGTCTGTGGTAATTGTGAAGAAATGTCAACTATCCAATGATGTTAACAACTCTTCTTCAGAACATGATGGTTCATTTGACGAGGCACTGCCTGAAATTGAAGCAAGATTTTGTGAGAGAAGTGTCCTCATAAGAGTACACTGTGAGAAGAGCAAAGGAGTTGTAGAAAACACAATCCAGGGAATTGAGAAACTTCATCTAAAAGTCATCAATAGCAATACCATGACATTTGGAAGATGTGCCCTTGATATAACAGTTATTGCTCAGATGGATATGGAATTTTGCATGGGAGTGAAGGATCTTGTGAGAAACCTACGCTCAGCTTTTACATCTTTCATGTGA 990 0.4091 MEISSIRGLPDDMEQEIMEDATFLHQWHLSSIDDPNLLPIAAAFGETLQHHAFSTYPNFNPKTSMETTLADDERGTKHHRNISLNPNSKSAQTSSETQFVSFPNLFSFVDSNHTTPPPDTISQGTLGNHNNYVFKACQEAKKTGKRYKHSQPQDHIIAERKRREKLSQRFIALSALVPGLQKTDKASVLGDAIKYLKQLQEKVNALEEEQNMKKNVESVVIVKKCQLSNDVNNSSSEHDGSFDEALPEIEARFCERSVLIRVHCEKSKGVVENTIQGIEKLHLKVINSNTMTFGRCALDITVIAQMDMEFCMGVKDLVRNLRSAFTSFM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01800 329 Gene3D - 146 224 IPR036638 GO:0046983
Gma07g01800 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 199 IPR011598 GO:0046983
Gma07g01800 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 214 IPR036638 GO:0046983
Gma07g01800 329 CDD bHLH_AtNAI1_like 153 224 - -
Gma07g01800 329 PANTHER BHLH TRANSCRIPTION FACTOR 2 328 - -
Gma07g01800 329 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 2 328 - -
Gma07g01800 329 Coils Coil 189 219 - -
Gma07g01800 329 MobiDBLite consensus disorder prediction 73 94 - -
Gma07g01800 329 SMART finulus 156 205 IPR011598 GO:0046983
Gma07g01800 329 Pfam Helix-loop-helix DNA-binding domain 153 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01800 Gma-Chr7 39170152 39172080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01800 150 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 55.738 2.34e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g01800 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01800 - - gmx:100799262 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01800 07 39170152 39172080 Gma15g00581 15 4813677 4817270 PCT
Gma07g01800 07 39170152 39172080 Gma13g02256 13 37417504 37420694 PCT
Gma15g00581 15 4813677 4817270 Gma07g01800 07 39170152 39172080 PCT
Gma13g02256 13 37417504 37420694 Gma07g01800 07 39170152 39172080 PCT