Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01798 ATGGCTTCCTCGGAGATCGAGGTGGTTTCATCATCATCGGTCTCCAAACCCAACAACGACCAGCCTCCAATCCTCGACATCTTCACCGCCTCTGCTCACGGCGACTTCAACAAATTGAGAACCTTCGTCGAACAAGACGGCGCCTCCGTCTCTCTTCCCGATTCTAACGGCTATTACGCTCTTCAATGGGCCTCGCTTAACAACTTCCACGACATTGCGCACTATCTCATTCAGCATGGGGCGGATGTCAATGCTAAAGACAACATGCAACAAACGGCATTGCACTGGGCGGCGGTTCGTGGTTCAACTCTAGCTGCTGATGTGCTCGTGGAGAACGGTGCTCGGGTTGAAGCTGCAGACGTAAATGGATACCGGGCAGTTCATGTTGCTGCACAATATGGACAGGCAGCTTTCTTAAATCATATTGTAGTAAAGTACCATGCTGATTTTGATGTGCCTGATAATGATGGATGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGCTGACACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACACCGTTGCACTGGGCTGCATTAAGAGGAAATGCAGAGGCATGCACTGTGCTTGTACATGCAGGCACAAAGGAAGAACTGATGGTGAAGGACAATTCTGGGAACACACCTGTACAGCTTGCATATGATAAAGGTCATCGGCATGTCGCTCCTTTCCTTTCAAATCAACAACGGGCTAGTAGAAACTACTGGAAAGGGAAACTGTGTAGTGGGATAGTGACAGATATTGGTTATGCTCCCATCTTATTTTGTACTATAATCTTTCTCTCGATCCTCTTCATCAACTCAGTCGTTGCAGCTCCTAACCTTAAAAAGATTACTGCCGTTGTTGGACTTTGGGCATGGACGGCGCTTTCTTCGGCCGTTGGTTCCCTGATTATGTTCTACAAGTGTAGTAGTAAAGATCCTGGTTATATAAAACGACCGGGAGACTTGGGTACTCAAAGTGATACTGAGGATCCGTTATTGAATATTGATCTGAATAGTTCCTCTGTTTGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCAACTTGTAAGCGATGTGTGGAACAGTTCGACCACCACTGTCCATGGATATCTAACTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCCTGGGAACTTTGACTTCTTCCCTTTCTGGTGCCGTTGCAGTTCAAAGAATTTGGACATCTACACCAGCATTACTGGCAGGAGAAACATGGATCCATTATGCGTTAGTAAAACATCCAGGTTTAGTTGTGTTTTTGGTGATGGATGCTGTTGTTTTTTTTGCAGCTACGACATTAACGCTAACACAGGCTTCCATGATAGCTCGAAATGTGACCACAAATGAACTAGCAAATTCCTCCCGTTATGATTACCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATATAACCACGGTTGTTGGAAGAATTGTGCTGACTTCCTTTTTCTCGGCTATACAAATGATGATGAGATTGCTTGGCCTCCATTACAGCAGCATCCTCTACTGCATTATCTAGCTCCTCAGTCGTAG 1647 0.4523 MASSEIEVVSSSSVSKPNNDQPPILDIFTASAHGDFNKLRTFVEQDGASVSLPDSNGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVRGSTLAADVLVENGARVEAADVNGYRAVHVAAQYGQAAFLNHIVVKYHADFDVPDNDGWSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNAEACTVLVHAGTKEELMVKDNSGNTPVQLAYDKGHRHVAPFLSNQQRASRNYWKGKLCSGIVTDIGYAPILFCTIIFLSILFINSVVAAPNLKKITAVVGLWAWTALSSAVGSLIMFYKCSSKDPGYIKRPGDLGTQSDTEDPLLNIDLNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSLSGAVAVQRIWTSTPALLAGETWIHYALVKHPGLVVFLVMDAVVFFAATTLTLTQASMIARNVTTNELANSSRYDYLRGPDGRFRNPYNHGCWKNCADFLFLGYTNDDEIAWPPLQQHPLLHYLAPQS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01798 548 Gene3D - 144 256 IPR036770 -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat region circular profile. 156 182 - -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Gma07g01798 548 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Gma07g01798 548 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 530 - -
Gma07g01798 548 Pfam Ankyrin repeat 56 88 IPR002110 GO:0005515
Gma07g01798 548 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 156 185 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 122 152 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 189 218 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 89 118 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 56 85 IPR002110 GO:0005515
Gma07g01798 548 SMART ANK_2a 224 254 IPR002110 GO:0005515
Gma07g01798 548 ProSiteProfiles DHHC domain profile. 363 413 - -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat region circular profile. 56 88 - -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Gma07g01798 548 SUPERFAMILY Ankyrin repeat 27 246 IPR036770 -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Gma07g01798 548 Gene3D - 4 143 IPR036770 -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Gma07g01798 548 PANTHER - 3 530 - -
Gma07g01798 548 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Gma07g01798 548 Pfam Ankyrin repeats (3 copies) 128 213 IPR002110 GO:0005515
Gma07g01798 548 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01798 Gma-Chr7 39125843 39136885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01798 71 247 Ion Channels AT2G25600 25.843 5.70e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01798 K20032 - gmx:100798740 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01798 07 39125843 39136885 Gma08g00611 08 5010231 5021486 GST