Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01768 ATGGTCGGCGGCGGTGGGAACCGACCGGAGGCGGAGCGGTGGCTCTACACCGCCAACAAGCTCCTGAGCGCGCGTGACCTGCACGGCGCGCGCTCCTTCGCGATCCGCGCGCGTGAGTCGGACCCGACCTACGAGGCCTCGGAGCACCTCCTGACGGTGATCGACACGCTCCTCGCCGGCGAGTCGCGGATCAACGACCACCACCGCGATTGGTACGGGATCCTCCAAATCCTCCTTTACACCACCAACATGGACCACATCGCCGCCCAGTATCGCCGCCTCGCGCTCCTCCTTGACCCTCACCGCAACATGTTCGCCTTCGCCAGCCACGCCTTTTCCCTCGTCAACGATGCCTGGTCCGTGCTCTCCATTCCCGCCAAGAAAGCCATGTACGACAGCGAGCTCCGCTTGCTCACCGCTCCGGCGCCGCAACATTATTCTCTTCCCCCGCAGCCTCAACCCACGCCGAGGCGGAACCCTAGATCCAGGGATAATTCGGCCAAGTTAAATCCTAATCCCACCCCGAACCGTGCCGAGTCGACTCGGACCGTGGAAACTGACACGGGAACGAGTTTCTGGACCTCGTGTCCTTATTGTTATGTTCTGTATGAATATCCGAAGGTTTATGAAGAGTGTACCTTACGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGGTCGCCGCCACCGTTGAGTGGGAAAGACGGTTCTTATTGTAGTTGGGGGTTTTTCCCATTAGGGTTTTCTGGGAATTCAAAGGATGTGAATGGGCATGCCTCGAATTGGAACCCGTTTTCGCCTTTGTTTCCTTGTCCCTTGAAGGGGTCGTCCTATAGGAGGCCTCAGAGGAATTGGGCTTACTATGACGACGAGGCTGCGGCGGCGTTTATCGAGTTGTCGGACCCAAGCGACGACGATTCCGGTGACGGGGACTGGAGGGGTGGGAAGAATAGGGGGAGGAAGAGGACTAGAGGGAAGAAAAATTCTGGTGATGGTAGGAGGGAAACTGTGAAGAGACCTAGGAGGGGTGCTCCTGTAGGAAATGAGAATTTGGGTTCTGGTGATGCTGCTACTGGTGCTAGTGCAGATGCTAATGTTGCCTCTGCTGTGCCGGCTGGTGCGAGGGGGGAGTCTAGTAAGAAGGCTGCGTTGGGTGGTTCGAGGAGGCGGGGTGCTGGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCGCGACCGCGAAGGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGTTTTTTTGAAGGCCTTGACGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGATTGTGGTTGTATAA 1392 0.5682 MVGGGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILLYTTNMDHIAAQYRRLALLLDPHRNMFAFASHAFSLVNDAWSVLSIPAKKAMYDSELRLLTAPAPQHYSLPPQPQPTPRRNPRSRDNSAKLNPNPTPNRAESTRTVETDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGHASNWNPFSPLFPCPLKGSSYRRPQRNWAYYDDEAAAAFIELSDPSDDDSGDGDWRGGKNRGRKRTRGKKNSGDGRRETVKRPRRGAPVGNENLGSGDAATGASADANVASAVPAGARGESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVRDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKIVVV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01768 463 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Gma07g01768 463 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Gma07g01768 463 MobiDBLite consensus disorder prediction 165 184 - -
Gma07g01768 463 MobiDBLite consensus disorder prediction 142 184 - -
Gma07g01768 463 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 460 - -
Gma07g01768 463 MobiDBLite consensus disorder prediction 331 345 - -
Gma07g01768 463 SMART dnaj_3 69 127 IPR001623 -
Gma07g01768 463 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 460 - -
Gma07g01768 463 CDD DnaJ 70 123 IPR001623 -
Gma07g01768 463 MobiDBLite consensus disorder prediction 407 427 - -
Gma07g01768 463 Gene3D DnaJ domain 59 144 IPR036869 -
Gma07g01768 463 MobiDBLite consensus disorder prediction 302 393 - -
Gma07g01768 463 Pfam DnaJ domain 70 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01768 Gma-Chr7 38830469 38832079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01768 10 460 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 43.319 8.68e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01768 - - gmx:100811866 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01768 07 38830469 38832079 Gma20g00040 20 498002 500274 GST
Gma07g01768 07 38830469 38832079 Gma15g00547 15 4525637 4527366 PCT
Gma07g01768 07 38830469 38832079 Gma13g02293 13 37720752 37722242 PCT
Gma15g00547 15 4525637 4527366 Gma07g01768 07 38830469 38832079 PCT
Gma13g02293 13 37720752 37722242 Gma07g01768 07 38830469 38832079 PCT