Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01758 ATGGCAATTTCACTGCCAATCAACTCAAATAACGGTGATCGAGTTCCTAATTTGGTTTTGCGAGATAAAAGCAAGATGCCAATTACAAATATGATGAAAATCATGAGTCAGATTCTTCTAAATAATGTACAAGTTTCATATGATACCATGGATATGATTCAACAAAGTGCTACAAAGTACATAAACTTTGTAACTAGAAAAGCCAAGGATCGATGCCAAAGTGAGTGTAGAAAGATTATGAATGCAGAGGACCTATTATGGGCTATAGAGGAATTGGGCTTTAATGACTACGTTGAGCCTCTCACTACTTTCATCCAACGCTATCGTAACATTGAAGGAGTTGATCTCTTCACTACCCATAAGGAGCCAATTTCTCACATTGAAAACCATGGGCCTAGTCTTGGGCCTGAGCCTAACCTTATGTCCACTTTGGAGATGCTTCATCCTCCACAACCACCACAAGTTAATTCTTCTCAGCCAAAATTTTCCATCATCCCAAACACAAATCTGGAAATGCTTTACCCAAATGAAATGAGTTCTACCAAAATACATTTGGTGTTGGTTGTTCAAATGATGTTTTCAACAACATTGATGTTTCTACTTTCTTCAATCATGATCAACATTGAGATGATAATAGAAGAAATTCAACTGCAATTAACAATTATGGCAATGGACTATGATATAGGCAATAAGTAG 696 0.3664 MAISLPINSNNGDRVPNLVLRDKSKMPITNMMKIMSQILLNNVQVSYDTMDMIQQSATKYINFVTRKAKDRCQSECRKIMNAEDLLWAIEELGFNDYVEPLTTFIQRYRNIEGVDLFTTHKEPISHIENHGPSLGPEPNLMSTLEMLHPPQPPQVNSSQPKFSIIPNTNLEMLYPNEMSSTKIHLVLVVQMMFSTTLMFLLSSIMINIEMIIEEIQLQLTIMAMDYDIGNK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01758 231 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 89 IPR003958 -
Gma07g01758 231 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Gma07g01758 231 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Gma07g01758 231 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Gma07g01758 231 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 120 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma07g01758 231 Gene3D Histone, subunit A 19 129 IPR009072 GO:0046982
Gma07g01758 231 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 20 120 - -
Gma07g01758 231 SUPERFAMILY Histone-fold 25 113 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01758 Gma-Chr7 38501167 38501862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01758 8 139 CCAAT-HAP3 Transcription Factor Family AT1G21970 42.069 4.03e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma07g01758 CBFD_NFYB_HMF 7.4e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01758 K08065 - sind:105175231 108.227