Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01747 ATGTCTCGCAAAGAAAATCTGATATCTGAGTTACACACCAGAAAAGGAACATGGAAAATAGTTGTGCGTATCACTGATCTTTGGCAAGCTCGAAAGCAAAATAGTAAACAAACAATTGAGATGGTGTTGATAGACCAAACGGGTTCAAAAATTGGAGCTACTCTCTGGCAAGAACTCTTCACTGAATTGAGGGACAAGTTACAGTGTGGTTCTTCGTATTTGATTCAAAACCTGAGGATTGTTGACAACCAATCTGAATACAGAGTCAGCCCAGCTCCATATTTGGTTTATTTCCTAAAAACTACATCTGTCAAGGAAATCCACCGTCCAGAAATTCCTTCTAATATTTATCTCATTACTCCTTTTAGTGATATAATCTCTGGCCTCGCACCACGCCATACTTTAGTGGATATTGTTGGTGTGGTTGCTGATTTCATCGATGTTAAGACAGTTAATCCCCCTCACAGGATGACAGTAAGGCTCAgggataacagTAACTGCGACATTCTAATAACTGTTTGGGAGGACTATGCTATTCAGCTAGATGATGCTATTGACAAAAACCTTATGCTTCAGGAACCATTGGTTGTTATGTTGACCCTAGGTAAAATCAAGGATGCTACAAGTGTGTCTGGTGTTGATGGTTCTCAGTCCCAATCTAGCCAGAGTAATGTGGTGGAAAAATTTATGCAGAATGCTCAGGTGGTCAGTATAGGTGAAATCAACAATCTCAGACAGGATTGTTACTGCTTAACTGTTGGAACAGTTGATGAAATCATTATTGAAGCTCCATGGAGTTATGACAGTTGTCCTAACTGTACAACCACATTTGATCCATCAAAAGGATGGAGCATAATGGGGACAAAGGAAACTTCTTTCTCTGGGATGCAACATGAATCAAGCTGTTTGGCTGGGGATGATATTAAGGTGTTTCCAACGTGTGTTGACGAAATTTTGTTCAAAACTTGGGTTGTCAGATTTAAGTTTCATTCACAATTACGCCAATCATCTGTGTTGGATGTGAGTGAAGAACTCCATCATATTCAATCATTGATAGCCACCCTTGGGTTGAAGGAACAATCAAGTAAGGGAAAAGGAATAGCTGTTGAGCCAGAAAGTTCACCACCAATTTTTGTTCCCATGCCATCATTGTCACAGTCTTCTGATTACGATCCTGAAAACTCCACCTGTTTAACTCCAACCAAAAGGATTAGTTGTCAACAAACCAGTTCTGATTTCGATTCTGATGAGCATACACAGTATCAGTTATCAAATAACAAACATATCAAAGCTGAGTAA 1299 0.3911 MSRKENLISELHTRKGTWKIVVRITDLWQARKQNSKQTIEMVLIDQTGSKIGATLWQELFTELRDKLQCGSSYLIQNLRIVDNQSEYRVSPAPYLVYFLKTTSVKEIHRPEIPSNIYLITPFSDIISGLAPRHTLVDIVGVVADFIDVKTVNPPHRMTVRLRDNSNCDILITVWEDYAIQLDDAIDKNLMLQEPLVVMLTLGKIKDATSVSGVDGSQSQSSQSNVVEKFMQNAQVVSIGEINNLRQDCYCLTVGTVDEIIIEAPWSYDSCPNCTTTFDPSKGWSIMGTKETSFSGMQHESSCLAGDDIKVFPTCVDEILFKTWVVRFKFHSQLRQSSVLDVSEELHHIQSLIATLGLKEQSSKGKGIAVEPESSPPIFVPMPSLSQSSDYDPENSTCLTPTKRISCQQTSSDFDSDEHTQYQLSNNKHIKAE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01747 432 PANTHER REPLICATION FACTOR A 1, RFA1 7 274 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma07g01747 432 MobiDBLite consensus disorder prediction 363 432 - -
Gma07g01747 432 Gene3D - 5 106 IPR012340 -
Gma07g01747 432 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 7 274 - -
Gma07g01747 432 SUPERFAMILY Nucleic acid-binding proteins 7 107 IPR012340 -
Gma07g01747 432 MobiDBLite consensus disorder prediction 379 432 - -
Gma07g01747 432 Gene3D - 111 249 IPR012340 -
Gma07g01747 432 SUPERFAMILY Nucleic acid-binding proteins 119 209 IPR012340 -
Gma07g01747 432 Pfam Domain of unknown function DUF223 40 134 IPR003871 -
Gma07g01747 432 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01747 Gma-Chr7 38183411 38185981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01747 8 211 Core DNA Replication Machinery Family AT2G06510 26.106 2.40e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01747 - - gsj:114420636 550.821