Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma07g01742 | ATGGGTTTGGTTATTCCTGAAGAAGAACTAAGCTTAGATTTGAGACCCTCTTTTGTTCCAAAAACCATCACTGATTTTCTCTGCCACCTTTCCACCACCCCAAATGCATCCGTCAAGGTGTCCTTGCTCGATGACTTTGTCCACAGATTGCAACTCGAATTGGCCAAGATCCAAGCATTCAAACGCGAACTTCCTCTCTGCATGTTCCTCTTAAATGATGCAATTTCAGCGTTGAAGGTGGAATCAGAAAAATGCATGGCTTGCAAGTCTGAGCCAGTGTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTGTGATCAGAGGGAGGAAAGTGAGAAGGAGAAGGAATGCAGGGACAAGAAGAGTTGGATGAGTTCTTTTCAGCTTTGGAACACTGATGATAAAGCTGATATTAACAACAATGCATATGAATGTGACAAAAAACAAAACTACGGAGTTGAAGACAAGAATAATAGAGAAGAAAGAAAATCTGTGGCCAAGGACTTGTTCCAATATGGTGGAATTAGAAATGGAGAGAAGGGGTTTGTTATGCCTTTTTCCACTTACCCTGCATCAAAGGAAGTAAAGGAAGATTGTGTTTTCAATGGACTTTCTCTTCAGACACCTGGAACTGCAGTGAAGAACACAAGGGAGGGATCTGGTTGCAGAACCAGCTCTTGCAGGGTGGTTTCCTCGGCTCCTTCACCGCTGCGTCAGCCACAAAGTGGCCGGAAACAAAGGCGGTGCTGGTCGCCGGAGTTGCATAGCCGGTTTGTTAAGGCTTTAGAGGAGCTTGGAGGTTCTCAAGCAACTACTCCAAAGCAAATTAGGGAACTCATGAGGGTAGATGGCCTGACCAATGATGAAGTAAAGAGTCATTTACAAAAATATCGACTTCATACACAGCGAGTTCCAGTTGCTAAAGCTGCAAATTCTAATCGCTCTGCCGTAGCTCTTGGAGGCTTGTGGATGCACAATGAATCCTTAAAGGGTAGAAGTTCTGGTTCTCCTCAAGGCCCTCTCCAATTAGCTACACAATCGGGGGAAGCGACATCCCGAACTGAAGATAAAGTAGAGGAGTTTTACAACTACTCAAGAACAACACATGATATTGATGATAAATAA | 1122 | 0.4403 | MGLVIPEEELSLDLRPSFVPKTITDFLCHLSTTPNASVKVSLLDDFVHRLQLELAKIQAFKRELPLCMFLLNDAISALKVESEKCMACKSEPVLEEFIPLKKECDQREESEKEKECRDKKSWMSSFQLWNTDDKADINNNAYECDKKQNYGVEDKNNREERKSVAKDLFQYGGIRNGEKGFVMPFSTYPASKEVKEDCVFNGLSLQTPGTAVKNTREGSGCRTSSCRVVSSAPSPLRQPQSGRKQRRCWSPELHSRFVKALEELGGSQATTPKQIRELMRVDGLTNDEVKSHLQKYRLHTQRVPVAKAANSNRSAVALGGLWMHNESLKGRSSGSPQGPLQLATQSGEATSRTEDKVEEFYNYSRTTHDIDDK | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma07g01742 | 373 | Pfam | Myb-like DNA-binding domain | 246 | 297 | IPR001005 | - | |
Gma07g01742 | 373 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 9 | 358 | IPR044787 | GO:0003700|GO:0006355 | |
Gma07g01742 | 373 | MobiDBLite | consensus disorder prediction | 351 | 373 | - | - | |
Gma07g01742 | 373 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 244 | 299 | IPR006447 | GO:0003677 | |
Gma07g01742 | 373 | PANTHER | TRANSCRIPTION FACTOR HHO6 | 9 | 358 | - | - | |
Gma07g01742 | 373 | SUPERFAMILY | Homeodomain-like | 242 | 302 | IPR009057 | - | |
Gma07g01742 | 373 | MobiDBLite | consensus disorder prediction | 327 | 373 | - | - | |
Gma07g01742 | 373 | MobiDBLite | consensus disorder prediction | 328 | 350 | - | - | |
Gma07g01742 | 373 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 243 | 301 | IPR017930 | - | |
Gma07g01742 | 373 | Gene3D | - | 243 | 301 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma07g01742 | Gma-Chr7 | 38033316 | 38035469 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma07g01742 | 9 | 323 | G2-like Transcription Factor Family | AT2G03500 | 36.176 | 7.60e-51 | 174 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Gma07g01742 | Myb_DNA-binding | 1.5e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma07g01742 | - | - | gmx:100803341 | 715.687 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma07g01742 | 07 | 38033316 | 38035469 | Gma20g00084 | 20 | 883035 | 886017 | GST |