Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01742 ATGGGTTTGGTTATTCCTGAAGAAGAACTAAGCTTAGATTTGAGACCCTCTTTTGTTCCAAAAACCATCACTGATTTTCTCTGCCACCTTTCCACCACCCCAAATGCATCCGTCAAGGTGTCCTTGCTCGATGACTTTGTCCACAGATTGCAACTCGAATTGGCCAAGATCCAAGCATTCAAACGCGAACTTCCTCTCTGCATGTTCCTCTTAAATGATGCAATTTCAGCGTTGAAGGTGGAATCAGAAAAATGCATGGCTTGCAAGTCTGAGCCAGTGTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTGTGATCAGAGGGAGGAAAGTGAGAAGGAGAAGGAATGCAGGGACAAGAAGAGTTGGATGAGTTCTTTTCAGCTTTGGAACACTGATGATAAAGCTGATATTAACAACAATGCATATGAATGTGACAAAAAACAAAACTACGGAGTTGAAGACAAGAATAATAGAGAAGAAAGAAAATCTGTGGCCAAGGACTTGTTCCAATATGGTGGAATTAGAAATGGAGAGAAGGGGTTTGTTATGCCTTTTTCCACTTACCCTGCATCAAAGGAAGTAAAGGAAGATTGTGTTTTCAATGGACTTTCTCTTCAGACACCTGGAACTGCAGTGAAGAACACAAGGGAGGGATCTGGTTGCAGAACCAGCTCTTGCAGGGTGGTTTCCTCGGCTCCTTCACCGCTGCGTCAGCCACAAAGTGGCCGGAAACAAAGGCGGTGCTGGTCGCCGGAGTTGCATAGCCGGTTTGTTAAGGCTTTAGAGGAGCTTGGAGGTTCTCAAGCAACTACTCCAAAGCAAATTAGGGAACTCATGAGGGTAGATGGCCTGACCAATGATGAAGTAAAGAGTCATTTACAAAAATATCGACTTCATACACAGCGAGTTCCAGTTGCTAAAGCTGCAAATTCTAATCGCTCTGCCGTAGCTCTTGGAGGCTTGTGGATGCACAATGAATCCTTAAAGGGTAGAAGTTCTGGTTCTCCTCAAGGCCCTCTCCAATTAGCTACACAATCGGGGGAAGCGACATCCCGAACTGAAGATAAAGTAGAGGAGTTTTACAACTACTCAAGAACAACACATGATATTGATGATAAATAA 1122 0.4403 MGLVIPEEELSLDLRPSFVPKTITDFLCHLSTTPNASVKVSLLDDFVHRLQLELAKIQAFKRELPLCMFLLNDAISALKVESEKCMACKSEPVLEEFIPLKKECDQREESEKEKECRDKKSWMSSFQLWNTDDKADINNNAYECDKKQNYGVEDKNNREERKSVAKDLFQYGGIRNGEKGFVMPFSTYPASKEVKEDCVFNGLSLQTPGTAVKNTREGSGCRTSSCRVVSSAPSPLRQPQSGRKQRRCWSPELHSRFVKALEELGGSQATTPKQIRELMRVDGLTNDEVKSHLQKYRLHTQRVPVAKAANSNRSAVALGGLWMHNESLKGRSSGSPQGPLQLATQSGEATSRTEDKVEEFYNYSRTTHDIDDK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01742 373 Pfam Myb-like DNA-binding domain 246 297 IPR001005 -
Gma07g01742 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 358 IPR044787 GO:0003700|GO:0006355
Gma07g01742 373 MobiDBLite consensus disorder prediction 351 373 - -
Gma07g01742 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 244 299 IPR006447 GO:0003677
Gma07g01742 373 PANTHER TRANSCRIPTION FACTOR HHO6 9 358 - -
Gma07g01742 373 SUPERFAMILY Homeodomain-like 242 302 IPR009057 -
Gma07g01742 373 MobiDBLite consensus disorder prediction 327 373 - -
Gma07g01742 373 MobiDBLite consensus disorder prediction 328 350 - -
Gma07g01742 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 243 301 IPR017930 -
Gma07g01742 373 Gene3D - 243 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01742 Gma-Chr7 38033316 38035469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01742 9 323 G2-like Transcription Factor Family AT2G03500 36.176 7.60e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma07g01742 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01742 - - gmx:100803341 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01742 07 38033316 38035469 Gma20g00084 20 883035 886017 GST