Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01716 ATGGAGGGAGGCGAGGATCTCCACCACCATCACCACCACCACCACCGTCACAACAACTTCCCATTCCAGCTACTTGAGAAGAAAGAAGACCAAGAAACCGCCTCATGCTCCACCTCCTCCCTTTACCCTTCCCTAGAAATCTCCACGAAACCGAGCATGTCCAATTCCACCCGATCCAACCAGCTCGTTGTGGTGGCTATGGTGGAGGCTCCTAACAGCAAAAAGCCTCCGCCGAAGCGCACCTCGACCAAGGACCGACACATGAAGCTCACCCGCGAGCTGTGCCACAAGTCAGACGGTGAAACCATCGAGTGGCTCCTCCAGCAAGTGGAGCCTGCTGTGATCGCCGCCACCGGTACCGGCATCATCCCCGCCAACTTCACCTCCCTGAACATCTCCCTACGTAGTTCTGGCTCCTCCATAACCTTCTTCCCCGGTATAGCCTTTTCCTCCGACAATACCAACAACAACACATCAACACTTCTCAATTTCCAATCCAACACCCTCAACACCACCATGCTGCAGCAGCAGGCCATGCCGGAGCTTAGCGATGGCGGCGTGTCGTCTTCCTTAGACATTTTAGACACCATTGTCTAA 597 0.5477 MEGGEDLHHHHHHHHRHNNFPFQLLEKKEDQETASCSTSSLYPSLEISTKPSMSNSTRSNQLVVVAMVEAPNSKKPPPKRTSTKDRHMKLTRELCHKSDGETIEWLLQQVEPAVIAATGTGIIPANFTSLNISLRSSGSSITFFPGIAFSSDNTNNNTSTLLNFQSNTLNTTMLQQQAMPELSDGGVSSSLDILDTIV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01716 198 Pfam TCP family transcription factor 88 173 IPR017887 -
Gma07g01716 198 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 89 173 IPR005333 GO:0003700
Gma07g01716 198 PANTHER TRANSCRIPTION FACTOR TCP23 89 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01716 Gma-Chr7 37140009 37140734 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01716 62 132 TCP Transcription Factor Family AT1G69690 63.441 7.47e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma07g01716 TCP 5.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01716 - - gmx:100790785 268.855