Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01709 ATGGATATGTGTAGTCCCAAACTGCTGTCTTCCTTATTTCTTGAAGCTTACGATATTCAGCTTTTGGCAGCTAGTGCCTTGGAGGAAAGAAACAAATTTCAAAACAAATTGCTATCGGAGAAAATATCTAATGGCACCAACATTTGGGATATTCTGCTTCTAGAAGGGAGGCGAGGATTCCACCACCGTCAGAACAACTTCCCATTCCAGCTACTTGAGAAGAAAGAAGACCAAGAAACCGCCTCATGCTCCACCTCCTCCCTTTACCCTTCCTTAGCAATCTCCATGGAACCGAGCACGTCCAATTCCACTCAATCCGACCAGCTCTCCATGGCGGCTGCGGCGGAGGCTCCTAACAGCAAAAAGCCTCCGCCGAAGTGCACCTCGACCAAGGACCGACACACGAAGGTGGACGGGCGCGGGCAGTGCATCCAAATGTCGGCCCTCTGCACCACCCGCATCTTCCAGCTCACCCACGAGCGGGGCCATAAGTCGAACAGTGAAACCATCGAGTGGCTCCTCCAGCAGGTGGAGCCTGCTGTGATCGCCGCCACCGGCACCGGCACCATCCCGCCATCTTAA 582 0.5344 MDMCSPKLLSSLFLEAYDIQLLAASALEERNKFQNKLLSEKISNGTNIWDILLLEGRRGFHHRQNNFPFQLLEKKEDQETASCSTSSLYPSLAISMEPSTSNSTQSDQLSMAAAAEAPNSKKPPPKCTSTKDRHTKVDGRGQCIQMSALCTTRIFQLTHERGHKSNSETIEWLLQQVEPAVIAATGTGTIPPS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01709 193 MobiDBLite consensus disorder prediction 96 113 - -
Gma07g01709 193 Pfam TCP family transcription factor 128 191 IPR017887 -
Gma07g01709 193 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 57 191 IPR005333 GO:0003700
Gma07g01709 193 ProSiteProfiles TCP domain profile. 130 184 IPR017887 -
Gma07g01709 193 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 57 191 - -
Gma07g01709 193 MobiDBLite consensus disorder prediction 96 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01709 Gma-Chr7 36879061 36880360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01709 109 191 TCP Transcription Factor Family AT1G69690 70.588 6.87e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma07g01709 TCP 5.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01709 - - gmx:100790785 220.32