Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01685 ATGTTCGTTTTTACTTTGTTTCTCATTGTTACCACATTTCTTTGCTACCTTGCTGCACCTTCTTTGATTCTCTCACCTGCATTTCCATTCAAAGTTTATCGGTCATGTTGTTGTGGCAGAATTATGGCACGTCCTCCTAATAACATCAAGTCTATTAATGGATCAAAAGAGGCACTTAAACTTGTCGTAAGAATTAATGATCTTTGGTTCATTGGGACTCCAAACAGATCTGAACAAGCAGAAATGGTCATAATTGATTCTCATGGAGATACAATCCATGTTGTCTGTAAACAAGATCAGTTAAAATCTTGGAAGGCTGATTTGATTGAAAATTATACTTACGTAATGCATAATTTTAAAGTCATGAAGAATGATGACCAATTTAGAATCTGTGATCACCAGTATAAATTAGTTTTTACTGGAGTTACTGTTCTCAGGCAATCCAATTTGGAGGATCTTCCCTTTAAGAAATATCAATTTGCTGATTTCACTAATATCGTTGCTGGGCTCTTCGAACCTAAATTGTTGGTTGACATTATTGGTGTCGTGGATGAGGTAGTCTATCGTCATGTGGGATCAGAGAATACAAGGGTTGTTTTCAAACTCAAGGATTTGAGTGGGCAAATCCTGTCTTGCACTCTGTGGGATAGTTATTGCTTGCAGTTCATAGACTACTTGAATCAGTCTGAAAACGATCTCCCCATCATTATTACATTGATTAATTCGTTGAGGGCCTCCAAATTATTGATCAATGAAGCTGTTTTTGAAATTCAAGAATTCAGAGAGAGGCATTCAGGTCCGGTCAGTTTCACAGCTGGTGACCAGGGGAGTTCCCAGGTTTCAGGTTCAAGCCAATTGTCGTCAAAAGATGCATTTCTTTCAAAAGCTGAGGCAAAGACAATCTTTGACATTAACAACATTTCTAAGGAGGGTGATATTGATTTGAATGTTTCTCCTCTGGCTCTTGATAAGTTGCTGGGTTATGTCCTTGCATTTAAAATCAAAGTTCAACCCAAGTTTAACAATAATGTTGTTCTTAGATACTCAAATGACTTAGATTTGATCAATGTTGTGGTGGATATACTGCCTGATGCTGAGCAATCTATGTCTGGCACAGCAGATCATGATCCACTTCTGGGTCTTCCATTGACACCTACAAAACGGTTACCATTTGATGACTATGATGATGAACCGAAAGCCTCTCAGATTTCACCGGCCTAG 1221 0.3817 MFVFTLFLIVTTFLCYLAAPSLILSPAFPFKVYRSCCCGRIMARPPNNIKSINGSKEALKLVVRINDLWFIGTPNRSEQAEMVIIDSHGDTIHVVCKQDQLKSWKADLIENYTYVMHNFKVMKNDDQFRICDHQYKLVFTGVTVLRQSNLEDLPFKKYQFADFTNIVAGLFEPKLLVDIIGVVDEVVYRHVGSENTRVVFKLKDLSGQILSCTLWDSYCLQFIDYLNQSENDLPIIITLINSLRASKLLINEAVFEIQEFRERHSGPVSFTAGDQGSSQVSGSSQLSSKDAFLSKAEAKTIFDINNISKEGDIDLNVSPLALDKLLGYVLAFKIKVQPKFNNNVVLRYSNDLDLINVVVDILPDAEQSMSGTADHDPLLGLPLTPTKRLPFDDYDDEPKASQISPA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01685 406 CDD RPA1_DBD_A_like 60 144 - -
Gma07g01685 406 Gene3D - 151 269 IPR012340 -
Gma07g01685 406 SUPERFAMILY Nucleic acid-binding proteins 158 264 IPR012340 -
Gma07g01685 406 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 52 305 - -
Gma07g01685 406 SUPERFAMILY Nucleic acid-binding proteins 49 145 IPR012340 -
Gma07g01685 406 Pfam Domain of unknown function DUF223 81 168 IPR003871 -
Gma07g01685 406 CDD RPA1_DBD_B_like 178 263 - -
Gma07g01685 406 Gene3D - 45 147 IPR012340 -
Gma07g01685 406 PANTHER REPLICATION FACTOR A 1, RFA1 52 305 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01685 Gma-Chr7 35334004 35336680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01685 84 219 Core DNA Replication Machinery Family AT4G19130 21.277 6.35e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01685 - - gmx:102667961 464.151