Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01676 ATGGAATCCCTAATGTCAAATGGAAGCACACAGTCTCGAAATACCATAAAAAACAAGCAAAGCAAAAGAGAACCTAATGGACCATCAAAATTGACGTACAGTTCCAGCTCCACAGTGAGGCAGGTCGCGAGAGCTAGGGAGGGTAGGGAGCAAAAGGGAGGGAATCCAACGTCGCGAGAGGGAGGGACAACGATACAAAAGGTTAGACCTTTGGACATGTCTACCAGATTTGTTGTGTTTGGTCTTCGTTTTTGTTTGGGTTGGTTTGTCATGTCTCGCAAAGAAAACCTCCTATGTGAACTGCATACAAAGAAAGGTACTTGGAAGATTGTCGTGCGAATAACTGATATATGGCGTCTTAACAAACATAATGGTCGACAATCCATTGAGATGGTGTTGATGGACCATACGGGTACAAAGATTGGGGCAACTCTATGGCAAGAATTGTTCCCTGAATTTGAGCCCAAGTTGCGTTGTGGTGGTGTATATGTTATTCAGAACGTGAAGGTTGTTGATACTCATTCTGACTACAAAGTGAATGCAATTAAATATTTGGTTTATTTTGTGAAGACAACGTCTGTCAAAGAGGTGGACAGACATGAGATTCCTCCTAATGTTCATGTCATTACTTCATTTGCTGATATAATTTCAGGCGTTGCAAAACTTGATACTTTAGTTGATATTGTGGGTGTTATTGCTGAAGTGATTGAACGCAAAACAGTTAATCCAGCATACAGAGTGACTGTCAAGTTGAGAGACAATAGTCATGTTGAGATCATCATGACTGTGTGGGAGGAATATGTTCTTCAGCTGAATGATGCTATTGAGAAAAACCATTTTGGGCAAAAGCCATTGGTTGTTATGCTAACTCTTGCTAAGATCAAAGAACCCAAGGACAAGTATCCCCTCAGTGTACAGAATATAAAGCATGGTTCGAAGTTGTATGTGAATGGTGACAAAAACGAAATTCAACAATTCCATGATAGTTTACGTGTGCCATTTTATATTGGCGGTCTAGATGATGAGGGTGGTGTTTCTCAGTCACAATCTACCCAGAATTGCCAAGATAAGTTTTTGCATAATGCTCAAATAGTGAGCTTTGGTGCAATAAAGACTCTGCGACAGGATTGTTACTATTTGACTGTGGGCACTGTCGATGAGGTGATGATTGATACTCCATGGAGTCATGACAGTTGTCCATACTGTACAACCACTTTTGATCCATTAAAAATAGGTGCAGCCTGCCGTTCGTGCCAGAATCATGTTACTCACACTATTCCAAGATATAAGTTAGTTGTCAAGATGGAACAGAATGGGGAGAAGGCGAACTTCCATTTTTGGGATGCAGTATGTATCAAAATATTTGGTAAAACTGCAGATGAATGTCGTCAAGATTTGATTGCGAGTGGTGATGAGATCAAGGTGTTCCCTGCGTGTGTTGATCAATTGTTGGGTAAAACTTGGGTTGTCAGATTCAAACACCGTATACAGATGCAACAATCATCCGTGTTGGATTTTAGTGAACAGGAACATCATATACAGTCAGTGATATCCACGCTAGGTCTACAGCCTTCATTGTCAAAGTCATCTGAATATGATCCTGGAAATGTTGCCTTTGTAATTCTTGCAAAAAAAACGTCTGATCAGCAAGGAAGTAGTCAGTTTGATAGTGACAACTTCACAACATAA 1689 0.4044 MESLMSNGSTQSRNTIKNKQSKREPNGPSKLTYSSSSTVRQVARAREGREQKGGNPTSREGGTTIQKVRPLDMSTRFVVFGLRFCLGWFVMSRKENLLCELHTKKGTWKIVVRITDIWRLNKHNGRQSIEMVLMDHTGTKIGATLWQELFPEFEPKLRCGGVYVIQNVKVVDTHSDYKVNAIKYLVYFVKTTSVKEVDRHEIPPNVHVITSFADIISGVAKLDTLVDIVGVIAEVIERKTVNPAYRVTVKLRDNSHVEIIMTVWEEYVLQLNDAIEKNHFGQKPLVVMLTLAKIKEPKDKYPLSVQNIKHGSKLYVNGDKNEIQQFHDSLRVPFYIGGLDDEGGVSQSQSTQNCQDKFLHNAQIVSFGAIKTLRQDCYYLTVGTVDEVMIDTPWSHDSCPYCTTTFDPLKIGAACRSCQNHVTHTIPRYKLVVKMEQNGEKANFHFWDAVCIKIFGKTADECRQDLIASGDEIKVFPACVDQLLGKTWVVRFKHRIQMQQSSVLDFSEQEHHIQSVISTLGLQPSLSKSSEYDPGNVAFVILAKKTSDQQGSSQFDSDNFTT 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01676 562 SUPERFAMILY Nucleic acid-binding proteins 98 198 IPR012340 -
Gma07g01676 562 MobiDBLite consensus disorder prediction 1 16 - -
Gma07g01676 562 Pfam Domain of unknown function DUF223 130 225 IPR003871 -
Gma07g01676 562 MobiDBLite consensus disorder prediction 25 42 - -
Gma07g01676 562 Gene3D - 200 333 IPR012340 -
Gma07g01676 562 Gene3D - 342 519 IPR012340 -
Gma07g01676 562 PANTHER REPLICATION FACTOR A 1, RFA1 100 488 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma07g01676 562 SUPERFAMILY Nucleic acid-binding proteins 210 332 IPR012340 -
Gma07g01676 562 SUPERFAMILY Nucleic acid-binding proteins 374 500 IPR012340 -
Gma07g01676 562 CDD RPA1_DBD_B_like 227 326 - -
Gma07g01676 562 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 100 488 - -
Gma07g01676 562 CDD RPA1_DBD_A_like 109 194 - -
Gma07g01676 562 MobiDBLite consensus disorder prediction 1 66 - -
Gma07g01676 562 Gene3D - 97 199 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01676 Gma-Chr7 35037922 35042482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01676 89 518 Core DNA Replication Machinery Family AT5G08020 19.533 2.68e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01676 - - gmx:102667453 941.028