Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01662 ATGGCATGTATTGCTGACAAGATAAAAACCATCGATGGATCTAAAGAAACTTTGAAACTTGCTGTAAGGATAACCGATCTCTGGTTTGTTGGGACACCGGGCAGGTCTGAACAAGCTGAGAAGATCATTGTTGACTCTGACGGTGATCAGATCCACGTGGTCTGTAAGCAAGACCAGTTAAAGGCATGGAAAATGGATTTGAAGGAAGGTTGTAGTTATGTGATGCATAATTTTAAATGTGGCTTAGATGGCGTTCCTTTAAAAAAGTATAGATTTGTAGATTTTTCAGATATCATTGCTGGCCAATTACAGTTTGACCTATTAGTAGACATCATTGGTGTTGTTGACGAGGTTGTCTTTCGTCATATTTCACCCAGAAGTAAGAGAGTTGTTTTTAAGCTTATGAATTTGAGTAACGAATTGGTGTCTTGCACTCTATGGGACGATTATTGTGTCCAATTTCTGGAATATTTGGATCAGCATGAGAATGAAGGGCCTATTATTGTGTTGTTGACCAATGCCAGAATTAAAGAGGGCCAGGGATACTATCCATGCTTGGTTAGCAATTCTTTGAAGGCTTCTACACTGACTATTAATGAACCACTATCACTAATTGAAGAATTCAATCAGAAGCTTTCAGAATTGGGCATTGAGATCCGGTCAATTTTGACACGTCGTTCCCAGTGGAGTTCACAGCCTTCAGGTTCTGCTCAGTTACCATCAAGGGAGACATTCATTTCCATGTCAGAGGCAAAGAGCATTTCTGAGATAAACAACCTTTGCAAAGAGTTTGTTTGTGTTACTGTTGGTACAATCACAAGGATTCTTATGGACAATCATTCATGGTGTTATCCATCTTGCATTCAGTGCTATAAGAAAATAGATGTCTATCCAGAACCATTTGTGTGCCCATGTGGCAAACATAATGATCGGGCTGTGCTTAGAGTTGAAGTCATGGTCAATTATAAAGATGAAAACACAAAATTTCTCCTGTGGAATTGTGAATGCACTGAATTGATTGGGCAGTCAGCTGATGAAGTCAACACCCTCAAAATAGAAGATGGTGATCTAGATTTAAATGCCTCCCCAAAAGCACTTGATAAACTACTGGGTCATCTGTTCACCTTCAAACAATTCATTTCTATAACAGCAGACCATGATCCACTTATTGGACTTCCCTTGACACCAACAAAACGACAACCATTTAATGAATGTGATGATGAAGCAAGAAGCTCCCAGATTTCACCAGCTCAGCTATCGTCCAACAAATTAGCAAAACATGAGAAGATAGAATAG 1296 0.3927 MACIADKIKTIDGSKETLKLAVRITDLWFVGTPGRSEQAEKIIVDSDGDQIHVVCKQDQLKAWKMDLKEGCSYVMHNFKCGLDGVPLKKYRFVDFSDIIAGQLQFDLLVDIIGVVDEVVFRHISPRSKRVVFKLMNLSNELVSCTLWDDYCVQFLEYLDQHENEGPIIVLLTNARIKEGQGYYPCLVSNSLKASTLTINEPLSLIEEFNQKLSELGIEIRSILTRRSQWSSQPSGSAQLPSRETFISMSEAKSISEINNLCKEFVCVTVGTITRILMDNHSWCYPSCIQCYKKIDVYPEPFVCPCGKHNDRAVLRVEVMVNYKDENTKFLLWNCECTELIGQSADEVNTLKIEDGDLDLNASPKALDKLLGHLFTFKQFISITADHDPLIGLPLTPTKRQPFNECDDEARSSQISPAQLSSNKLAKHEKIE 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01662 431 SUPERFAMILY Nucleic acid-binding proteins 251 380 IPR012340 -
Gma07g01662 431 MobiDBLite consensus disorder prediction 401 431 - -
Gma07g01662 431 CDD RPA1_DBD_B_like 110 210 - -
Gma07g01662 431 Gene3D - 88 219 IPR012340 -
Gma07g01662 431 Gene3D - 234 385 IPR012340 -
Gma07g01662 431 PANTHER REPLICATION FACTOR A 1, RFA1 11 334 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma07g01662 431 MobiDBLite consensus disorder prediction 407 422 - -
Gma07g01662 431 Gene3D - 6 87 IPR012340 -
Gma07g01662 431 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 11 334 - -
Gma07g01662 431 SUPERFAMILY Nucleic acid-binding proteins 90 209 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01662 Gma-Chr7 34368625 34371120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01662 85 358 Core DNA Replication Machinery Family AT5G08020 25.784 7.85e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01662 - - gmx:102666564 808.905