Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01619 ATGGCTACAAACAGATTCTTGTGTGAAACTTGTGGGAAGGGTTTCCAAAGGGATCAAAATCTCCAACTTCATAGACGTGGACACAACCTTCCATGGAAGCTTAAGCAAAGGACAGGAAAGGAAGCAAGAAAAAGGGTTTATGTGTGCCCTGAGAAGAGTTGTGTCCACCATGACCCTTCAAGGGCTCTTGGAGACTTAACTGGGATAAAGAAACACTTTTGCAGAAAGCACGATGAGAAGAAGTGGAAGTGCGAGAAGTGCTTGAAGCGTTATGCTGTGTAG 282 0.4468 MATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTGKEARKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHDEKKWKCEKCLKRYAV 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01619 93 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Gma07g01619 93 SUPERFAMILY beta-beta-alpha zinc fingers 4 29 IPR036236 -
Gma07g01619 93 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 93 - -
Gma07g01619 93 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Gma07g01619 93 Gene3D Classic Zinc Finger 2 29 - -
Gma07g01619 93 PANTHER ZINC FINGER PROTEIN MAGPIE 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01619 Gma-Chr7 32864556 32864837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01619 1 93 IDZ Gene Family AT1G03840 92.473 9.29e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma07g01619 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01619 K25870 - gmx:100790620 203.756