Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01593 atgttcaaccctcctgGACCTTCTCCTTCACTCCATTACCATCTTCATTCTCCTTTGTCACCTCACTTTCTATCTTCCTCCTCGTCGTTTAAGTTACACATCATCAGAGCCTCCTCCCAAAACAACCTCACATTTCACACCCCTTATACTCCAAACCCTAACCTCGTTCATCGCCACCACTGCCTTCTTCTTCATTCACTTCCACAACACACACCCTCGTTCTTCACCTCGCACCGAAACGCGTGGCTGGCGAAGGAGAAGTGCCTCCAACACCAGATTGATGCCACGAGGGAGAAGATTGCGCACCTGTGTGGCTGCGTGGTGGAGCTCGATGATGGAGGAAAAGCATTTTTGGAAACAATAATGGCTTTGATTCAGAGTCTGCAGCTCCCAAATGAAACGACAGTCCCATCCTCCGCCACCCCCGCGTCCTCCACTCCCGATTCAACTCTAACCCTCAATTCCCTTCCCAATCAACCCTTCGTCATAGGAGTTTCTGGAGATACTGCCTCGGGCAAAACCACCGTCTGCGATATGATCATTCAACAACTCCATGATCACCGTGTTGTCCTCGTAAATCAGGACTCATTTTATCACTGGTTGAATCCTGAAGAATTGGAACGTGTTCACGAGTACTATTTCGACCACCGTGATGCTTTTGACACGGAGCAGTTGTTAAAGTGCACGAGGAAGCTCATCAGTGGCCAGGGCGTGCATGTTCCCATTTATGACTTCAAGAAGCAGCAACACTCTTCTGATAGTTTTCGCCAGgagggactcttccCACCGCAAAATGCAAGGGTTGTGGTTGTAGGCGATATTGAGGGCCCCCCAAAGTGTTTGGTAGGGGTATACCGCAAAATGCCTGCCCCTCAGCGGCATATTCGAGTAACACTTGCTTGTGTTATTGTTGCTTCTCTTGCAAGTATCATGAGTGATTTTGCTTGGAGACCACTTGTGAAGCAAGTCAGACCTGCTGGTGGTGTTGTGCCACCATCATCTACAACTCTTCTTGAAGGGGGTCAACCTACAGTTGAGGTTAGCCCTACCGCTGAGGTTGCCCCCAATGCCCTTTCCTCTATTTTGGCTAAGAGGAAGAGGGATGATTGTGCTAGGGCATTGGGCCTCAAGAAGTTGAGGGGCCCCATGAGCCTTTGTGCCCTGAGGCAAGCTACAGGATTGACGCTTGGCGTGGGTTGCCCTTTGAGTTTGCAAGATTTGCCTCCGGCTTCACTGGCTGTCAAGGCTTCTATTGCTATTGTTGCTACTTCTGTTACTCCTGCTTCTTCACCTCCTCTTGCTATGCCTGTTCAGGAGGCCGCTCCTGATGTTGTTGAAGTTAGTGTGCCAACTGCTTTGCCTGGTTTTGTTATGGCGTCGTTGTCCACCATTGTTGCACCTTTGTTGAGTGTTGGTGTGGTGACCACTAGTGCTTTTGTTGTGCCTCCTCATCCTTCTTCTTCAGATCCATTAGTTCTACCCTTTGTTGTGTTGGCGGTGGTGTCGCCTTCCTCATCTTCTTATCCTTCTGAATGTTTGTGTGTTAAATTGATTTTATGTTTTTGA 1566 0.4802 MFNPPGPSPSLHYHLHSPLSPHFLSSSSSFKLHIIRASSQNNLTFHTPYTPNPNLVHRHHCLLLHSLPQHTPSFFTSHRNAWLAKEKCLQHQIDATREKIAHLCGCVVELDDGGKAFLETIMALIQSLQLPNETTVPSSATPASSTPDSTLTLNSLPNQPFVIGVSGDTASGKTTVCDMIIQQLHDHRVVLVNQDSFYHWLNPEELERVHEYYFDHRDAFDTEQLLKCTRKLISGQGVHVPIYDFKKQQHSSDSFRQEGLFPPQNARVVVVGDIEGPPKCLVGVYRKMPAPQRHIRVTLACVIVASLASIMSDFAWRPLVKQVRPAGGVVPPSSTTLLEGGQPTVEVSPTAEVAPNALSSILAKRKRDDCARALGLKKLRGPMSLCALRQATGLTLGVGCPLSLQDLPPASLAVKASIAIVATSVTPASSPPLAMPVQEAAPDVVEVSVPTALPGFVMASLSTIVAPLLSVGVVTTSAFVVPPHPSSSDPLVLPFVVLAVVSPSSSSYPSECLCVKLILCF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01593 521 PANTHER URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC 129 254 - -
Gma07g01593 521 PRINTS Uridine kinase signature 235 250 - -
Gma07g01593 521 PRINTS Uridine kinase signature 190 201 - -
Gma07g01593 521 PRINTS Uridine kinase signature 160 177 - -
Gma07g01593 521 Pfam Phosphoribulokinase / Uridine kinase family 162 252 IPR006083 GO:0005524|GO:0016301
Gma07g01593 521 PANTHER URIDINE KINASE 129 254 - -
Gma07g01593 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 250 IPR027417 -
Gma07g01593 521 Gene3D - 70 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01593 Gma-Chr7 30844950 30855931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01593 157 268 PRT Gene Family AT5G40870 66.942 1.42e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01593 K00876 - gmx:100780005 216.083