Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01583 ATGGCCACACCTTCTGAAGTCCCTAGAGCTGGAGAAGAAAGGATCAAGGCTTCTCCACCGGCCTCGcctcctccttctcctcctcctcctcctcctcctcctatttccgatgcatcagcttcaccgtctgctGATATTGTAATTGCTTCCATCGGCTATAATGAGGTTGACCAACTACCTCAAGCAAATATTGGTTTTCCTTGTGTTTCAACAAAATTAAGGTCTAAAAGGGGTTCAAGGGATCCTGAAAGTCCATCCAAGCATGAAACTAAATCTTCAGTGCTAAAGAATAATGCATGTAGCACTAATGATAATCAAAATTTGAACAATGTGGTTGTGGATGACAGCGACAACACTGGAGTAGCATCTAATCATGGAGACAATGGATCTCAAGAAATAGATCCTCAAATTAGACAAAATAATGGATCACAGGCAAGAGATAAGAAAAGGAGGCTTAACATGGAACAAGTGAAGACACTTCAGAAGAGCTTTGAGTTGGGAAACAACCTTGAACCTGAGAGGAAAATGCTGCTTGCAAGGGCTCTTCGATTGCAACCTAGACAGATTGCTATATGGTTCCAGAACAGAAGGACTAGGTGGAAGACCAAGCAGTTGGAGAAGGACTATGATCTTCTCAAAAGACAATATGAAGCTATAAAGGCAGATAATGATGCACTTCAATTTCAGAACCAAAAACTTTAG 702 0.3675 MATPSEVPRAGEERIKASPPASPPPSPPPPPPPPISDASASPSADIVIASIGYNEVDQLPQANIGFPCVSTKLRSKRGSRDPESPSKHETKSSVLKNNACSTNDNQNLNNVVVDDSDNTGVASNHGDNGSQEIDPQIRQNNGSQARDKKRRLNMEQVKTLQKSFELGNNLEPERKMLLARALRLQPRQIAIWFQNRRTRWKTKQLEKDYDLLKRQYEAIKADNDALQFQNQKL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01583 233 SUPERFAMILY Homeodomain-like 133 205 IPR009057 -
Gma07g01583 233 PANTHER HOMEOBOX LEUCINE ZIPPER ATHB-LIKE PROTEIN 113 233 - -
Gma07g01583 233 MobiDBLite consensus disorder prediction 1 43 - -
Gma07g01583 233 CDD homeodomain 146 204 IPR001356 GO:0003677
Gma07g01583 233 ProSiteProfiles 'Homeobox' domain profile. 143 203 IPR001356 GO:0003677
Gma07g01583 233 MobiDBLite consensus disorder prediction 73 149 - -
Gma07g01583 233 Coils Coil 202 229 - -
Gma07g01583 233 MobiDBLite consensus disorder prediction 18 38 - -
Gma07g01583 233 MobiDBLite consensus disorder prediction 74 90 - -
Gma07g01583 233 MobiDBLite consensus disorder prediction 91 142 - -
Gma07g01583 233 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 113 233 IPR045224 GO:0003700
Gma07g01583 233 Pfam Homeodomain 147 201 IPR001356 GO:0003677
Gma07g01583 233 SMART HOX_1 146 207 IPR001356 GO:0003677
Gma07g01583 233 ProSitePatterns 'Homeobox' domain signature. 178 201 IPR017970 GO:0000981|GO:0006355
Gma07g01583 233 Pfam Homeobox associated leucine zipper 203 233 IPR003106 GO:0006355|GO:0043565
Gma07g01583 233 SUPERFAMILY Formin homology 2 domain (FH2 domain) 23 34 - -
Gma07g01583 233 Gene3D - 139 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01583 Gma-Chr7 30366069 30372013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01583 140 233 Homeobox Transcription Factor Family AT1G69780 78.723 4.27e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma07g01583 Homeodomain 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01583 K09338 - gmx:100779430 294.278