Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01581 ATGGCACATTCTCCAGACAAGATAAAGAACATCGATGGCTCAAAAGAAACTCTTAAACTTGCTGTGAGGATCACTGATCTATGGTTTATTGGGATGCCTAACAAATCTGAGCAAGCTGAGATGGTTTTTGTCGACTCCAATGGTGATGAGATCCATGTTGTTTGTAAACAAGACCAACTGAAGTCTAGGAAGATGGACTTGAAGGAAAATTGCAGTGGATTTGCGGATGTTGTGGCTGGCCAGTTTGAACCAGGCCTATTGGTTGATGTTATTGGTGTTGTGGAGGAGGTTGTCTTTCACCATGTTTCAGGAAAAGGTAGAAGGGTAGTCTTTAAACTAAAGGACTTGAGCCAACAATTTTTATCTTGCACTTTGTGGGACGATTATTGCTTGCAGTTTTTAAAATTCTTAGATGATCATGAAGGTCATGGCCCAATTACAGTTCTATTGACCCATGGTAGAATAAAGGAAGCTCAGGGATCTTATCCGCCATCGGTCAGCAATTCTTTCAAGGCTTTAAAGTTAGTTATTAACCAACCTGTGATGGAGATTCAAGAATTCAATGAATGGCTTGTAGAGTTGGGCACTCAGGCCCGGTCAGTTTTTAAATTCCATGGTGAAGGCAGTTCACAAGTTTCAGGTTCTATCCAATTATCATCAAAGGAATCATTCTTTGGAAAGGTTAAGGTAAAGACTATTGTTGAGATTAACACCATCTCTAAAGAAGTTGTTTGTGTAACTGTTGGCACAATTACTAGGATTGTTATGGACAATCATTCATGGTGTTATACAACTTGCATTCAGTGCCATAAAAAAAGTGATGCAGAGATGGCGCCCTTCACATGTGCATGTGGCAAATACAATAAGGAAGTTGTGCTTAGGTATAGGCTTGAGGTGATGATCAACCACAGAGATGAAAGCACAAAATTCCTGCTTTGGGACTGTGAATGCACTGAATTAATTGTTCAATCAGCTGATGCAGTTAATAGGCTTAAAATTGAAGATGGTGATGTTGATTTAAATGCTTCACCCGAAGCACTTGATAAGTTGTTGGGTTATGTACTTGCTTTTAAGATAAAGGTGCAACCCAAGTTCAGGAATTCTACTGTTTTGAAATGTTCAACTGACTCAAGCTTAATAAATGCTGTGATGGATATGCTAGCTGATGCTGAGCAATCCATGTCTGTGACAGCAGACCATGATCCACTGTTTAGGCTCCCATTGACACCTACAAAGCGGCAGGCATTTCAAGATTGTGATGATGAAGCAGGGAGCTCTCAAATTTCACCTGCATAG 1296 0.4012 MAHSPDKIKNIDGSKETLKLAVRITDLWFIGMPNKSEQAEMVFVDSNGDEIHVVCKQDQLKSRKMDLKENCSGFADVVAGQFEPGLLVDVIGVVEEVVFHHVSGKGRRVVFKLKDLSQQFLSCTLWDDYCLQFLKFLDDHEGHGPITVLLTHGRIKEAQGSYPPSVSNSFKALKLVINQPVMEIQEFNEWLVELGTQARSVFKFHGEGSSQVSGSIQLSSKESFFGKVKVKTIVEINTISKEVVCVTVGTITRIVMDNHSWCYTTCIQCHKKSDAEMAPFTCACGKYNKEVVLRYRLEVMINHRDESTKFLLWDCECTELIVQSADAVNRLKIEDGDVDLNASPEALDKLLGYVLAFKIKVQPKFRNSTVLKCSTDSSLINAVMDMLADAEQSMSVTADHDPLFRLPLTPTKRQAFQDCDDEAGSSQISPA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01581 431 SUPERFAMILY Nucleic acid-binding proteins 82 191 IPR012340 -
Gma07g01581 431 CDD RPA1_DBD_B_like 104 188 - -
Gma07g01581 431 SUPERFAMILY Nucleic acid-binding proteins 230 368 IPR012340 -
Gma07g01581 431 PANTHER REPLICATION FACTOR A 1, RFA1 11 315 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma07g01581 431 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 11 315 - -
Gma07g01581 431 Gene3D - 66 201 IPR012340 -
Gma07g01581 431 Gene3D - 213 385 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01581 Gma-Chr7 30323889 30326254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01581 87 339 Core DNA Replication Machinery Family AT5G08020 24.904 6.05e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01581 - - gmx:102660369 795.038