Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01572 ATGTTGGCCTCCACCATCCTAACGCCCACGAAGCTCAACACTTCGCATTTCGTCCCACCCATCACCGTCGTCGTCGCAGAAACTCACCCGAGAAACAGAGTCGCACTCTTTCCCAAATCCAACTCCAAACTCGCTTTCGTTGCAAGGGCCAATGGTAATGCCCGTGACGGCGCCGTCGACGCCACCTCTCCCCTGGGCATTGATGCTGTAACGAGTACATCTTCTGGCCTCAGTGATGGTTATGTGGCTTTGTTCGTTCGTATGTTAGGCATTGATCGTGATCCTCTGGATAGAGAACAAGCTATAGTTGCTCTCTGGAAATATTCGCTTGGTGGAAAGAAGTGTATAGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTACGATCAGAGTCTAATTCAGCATGTGAGGCAGCTGCGGGTCTTCTGCGATCACTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAAGAGTTAAACAGATTGCTGAGGCAATCTTCCTTGGCATCTGAGGTAAAGGAGCAGAGTTTGAGTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGCATTAAAATTTCAAAGACTGAGATTCTGCCATTAGCTATTAGGTACCTTGACGATGAGGATATAAAAGTAAAGGAGGCTTCAGGGGGCATTTTGGCAAATTTAGCATCGAGCCGTGTTAACCACAACATCATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTGACATCTAATTTGGAAGGATCTAAAGTTCTTAGGAAGGTCACAAGGAATGCATTGCTGGAACTTGTTAAGGACAAGTATTATAGCATTCTTGTTATTGAGGAAGGTCTGGTCCCTGTGCCATTAATTGATGCTGCAGCCTTTAAGTCATTCACCCCAGGCATACATTTGTGGCCCATGTTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCCAGATATGGTGCTTCGGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAAGTCAATGCAATTGTTGGACGAACACAACAGCAATTCCTTGCTCGTGTTGGGGCTTTAGAAATGGAACAAAAGACTATGCCTCATTCTGAATGCTCAAATGATCAGAGGTTTACACTTTTACCTTGGATGGATGGTGTTGCTCGTTTAGTACTGATACTAGAACTTGAAGATAGGTTTGCAATAATTAAGGCTGCAGAGTCAATTGCTACTGCATGTATCAATGAACATATGCGTATAGCATTCAGGGAAGCTGGAGCAATAAAGCATTTAGTAAGGCTTTTAAATTGTGATGATAATTCAGTCCAGTTGGCAGCCACACAAGCCTTGGAAAGGCTGTCCGTTAGCAATATTGTTTGCCGGGTTATTGAAGCTGAGGGGGTTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCAGAGATAGCTGGAACTATTTTGGAAAAGTCTTTGAACATACTTGCTCGGATATTAGACCCCAGTAAAGTGATGCAATTAAAGGTTTTTAATGGATCTGAAAAGGCATTTGGTGGAACAAAAGGTGACTGTGTTTCAACCGGGTTTAGTAGCACTGAACAAGCTGTATCAAAAACGTACACAAGGAATGATATACTGGATTCTGTTTTCATTGCACACCTGGTTGAGATTATGAAGTCCTCTCCTCCCAGTTTACAAGAAAAAGCTGCTACTGTGCTTGAGTTTGTGGCATTGACTGACCCAACTCTGGCCCCAATTATATTTCTGGATATTGAATCTGGTCTGAATTCAGCTTTTCAGCAAAAAATTTTGAAAATTTCAGCGGACATGGAATCTGACGTAGAAGATCAGTTTTCTGAAGCATATGCAATTGAATTTGAAGAAGCTGGTCTTGCAATAGCTGCAGCATCCCGGTTATTAACAAGACTACTCGATCATGAGCAGTTCCGCCACAAAATAAACTCCTCGCAATTCATTGATTTGCTTCGGGGAATCCTCAGGTCCTGCATTCCCCTCCACAATAAAAAGTGGGTAGCTACTTGCCTAGTTAAACTAAGTTCTCTCTCTGGCTCCATCACGAGCCTCTATCCAATCAATGTGGAAGTTACTCTCTACGAGACAATCCCAAGACTTCTGGAACAGATCAAAACATCATTCTCCCCAGAAGCACAGGAAACAGCTGTTGTTGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTACACAGAAGCTATTATTTCTGATGAAGCAATATATTCATTGGTGAATTTGATAGAAGAAGGCAGTGATAGGGCTGTGGAAGCAAGCTTGGCAATACTGTATAATCTGAGTATGGACAGTGAGAACCATTCAGCACTTGTGGCTGCTGGAGCAGTGCAGGTCTTAAAAAGAAGTGTTCTAGCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGA 2499 0.4222 MLASTILTPTKLNTSHFVPPITVVVAETHPRNRVALFPKSNSKLAFVARANGNARDGAVDATSPLGIDAVTSTSSGLSDGYVALFVRMLGIDRDPLDREQAIVALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESNSACEAAAGLLRSLSSVNLYRNSVADSGAIEELNRLLRQSSLASEVKEQSLSTLWNLSVDEKLCIKISKTEILPLAIRYLDDEDIKVKEASGGILANLASSRVNHNIMVEAGVIPKLAKFLTSNLEGSKVLRKVTRNALLELVKDKYYSILVIEEGLVPVPLIDAAAFKSFTPGIHLWPMLPDGTEIERTSRQPSRYGASELLLGLNIDDKNANLEEAKVNAIVGRTQQQFLARVGALEMEQKTMPHSECSNDQRFTLLPWMDGVARLVLILELEDRFAIIKAAESIATACINEHMRIAFREAGAIKHLVRLLNCDDNSVQLAATQALERLSVSNIVCRVIEAEGVLGPLVSILKCSEIAGTILEKSLNILARILDPSKVMQLKVFNGSEKAFGGTKGDCVSTGFSSTEQAVSKTYTRNDILDSVFIAHLVEIMKSSPPSLQEKAATVLEFVALTDPTLAPIIFLDIESGLNSAFQQKILKISADMESDVEDQFSEAYAIEFEEAGLAIAAASRLLTRLLDHEQFRHKINSSQFIDLLRGILRSCIPLHNKKWVATCLVKLSSLSGSITSLYPINVEVTLYETIPRLLEQIKTSFSPEAQETAVVELNRIISEGVVDYTEAIISDEAIYSLVNLIEEGSDRAVEASLAILYNLSMDSENHSALVAAGAVQVLKRSVLANRPHWERALLLLRILQP 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01572 832 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 198 IPR000225 GO:0005515
Gma07g01572 832 Gene3D - 384 612 IPR011989 -
Gma07g01572 832 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 441 472 IPR000225 GO:0005515
Gma07g01572 832 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 124 166 IPR000225 GO:0005515
Gma07g01572 832 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 763 805 IPR000225 GO:0005515
Gma07g01572 832 Pfam Armadillo/beta-catenin-like repeat 430 469 IPR000225 GO:0005515
Gma07g01572 832 SUPERFAMILY ARM repeat 78 495 IPR016024 -
Gma07g01572 832 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 831 - -
Gma07g01572 832 Gene3D - 614 830 IPR011989 -
Gma07g01572 832 Gene3D - 77 307 IPR011989 -
Gma07g01572 832 SUPERFAMILY ARM repeat 393 810 IPR016024 -
Gma07g01572 832 SMART arm_5 112 153 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 238 281 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 430 470 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 154 196 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 197 237 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 752 792 IPR000225 GO:0005515
Gma07g01572 832 SMART arm_5 551 591 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01572 Gma-Chr7 29019733 29026574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01572 124 251 U-box Gene Family AT2G23140 33.594 2.01e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01572 - - gmx:100810447 1578.53