Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01562 ATGTCTGCCACCTGCGCTGCTTGGATCTTCCATCTGACCCGAGAGCTTGACCACAAATCCGGCGGCGAGATCGTCCGCTGCCTCCTGGAGCACGCCGACTCGGCTATCATCGAGGCCACTGACACCGGTACAGTTTTGGCCATCGCGGTCTCCGTTGGCGGCAAGCTCAAAATCCCAACCACCTCATCCAACGAGAAAGAAGTCGTCACCATCGCCGCCGCCTCAAACAAGAAGTGGAAACGCCCCTAA 249 0.5863 MSATCAAWIFHLTRELDHKSGGEIVRCLLEHADSAIIEATDTGTVLAIAVSVGGKLKIPTTSSNEKEVVTIAAASNKKWKRP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01562 82 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 81 IPR005333 GO:0003700
Gma07g01562 82 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Gma07g01562 82 Pfam TCP family transcription factor 1 51 IPR017887 -
Gma07g01562 82 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01562 Gma-Chr7 28089282 28089530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01562 1 62 TCP Transcription Factor Family AT5G51910 70.968 2.29e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma07g01562 TCP 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01562 - - gmx:100781096 112.849