LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g01549	ATGGCTTACCCTTGTTCTAACAAGGCCTTAGGTTGCTACCTCTTATTTTCCATTGTTATATCTTTCTTTTCAACCTTTTCTCGTGCTCATTTTGATCATGGATTTATCCATATTGAACCAATAATATTCCCAAACGTTGATGCTTATGCACCCACACTTGAATTTGATACTATTGCACCAACTCCAAAAATTGAAGATGATTCACAACTTGCTCCACCACCCGAAGTTGGTGCCATTCCACCAACTTTTGAAGTTCAAAATGATGCACCACTTGTAAATGAAAGGCTAAAAAAGGCCTATGTTGCTCTTCAAGCATGGAAAGAGGCTATTTACTCTGACCCTTTGAACACAACTGGTAATTGGGTTGGTGAAGATGTCTGCTCCTACAATGGTGTGTTTTGTGCTCCCGCCATTGATGATCCCACATTGAATGTGGTTGCTGGTGTTGATCTCAACAATGCGGACATTGCTGGTCACCTCCCAGAAGAGTTAGGCAACTTGTCAGATATTGCACTTTTCCACATTAACTCCAATAGATTTTGTGGAATTGTGCCAGAGACCTTGGAAAATCTCACACTTCTTCATGAGTTTGACATTAGCAACAATCACTTTGTTGGTGGTTTTCCATCTGTGGTTCTCAAATGGCCAAACTTGAAGTACTTGGATATCAGATACAATGACTTTGAAGGACCCTTACCTCCAGAGCTATTTGAGAAGGATCTTGATGCAATATTTTTGAACAATAATCGTTTCACGTCTATCATCCCAGACACTCTAGGAAAATCCAAGGTCTCAGTTGTGACCTTTGCTAACAACAAATTCACGGGTTGTATTCCAAAGTCTATTGTGAACATGAAAAACATGAATGAGATTGTGTTCATGGGCAATGACCTTGGAGGTTGCTTGCCACAAGAGATTGGATTGTTGGAAAGCATAACTGTTTTAGATGCTAGTCATAATGGTTTTGTAGGGACTCTTCCTAACTTGTCAGGACTGAAGAATGTTGAGGTCATAGACATTGAACACAACAAGCTTAGTGGATATGTGTCTAACATTGTTTGCCAACTTCCTTTGCTGAAGAACTTCACATTCTCTAACAACTACTTCAATGGGGAAGCTCAAACTTGTGTGCCTTCATCTAATTCATTGGTGGCTTTGGATGACTCAAAAAATTGTTTATCAGGAAGGAAGAATCAAAAGTCATCTAAGCAATGTTTGTCGGTGCTAACTCGCCCTGTGGATTGTAGCAAACATTGTGGTGGAGGCAAAGGTAATGACAATGttaactcaccaccaccccatgtgtcttcaccacctccaccaacccctatgtcctcaccacctccaccaatctactccccaccaccttttgtgtcctcaccacttccaccagttaactccccaccaccctctatgtcctcaccacttcaaccagtcaacttcccatcaccaccccatgtatcctcaccacctccactagtccacaccccaccaccaccaccagttaactctccattacccctcgtgtcctcaccacctccaccaatctactctccaccaccaccaccaatcaactctcctcctccaccaacacttattctctctccatctgccctagtacattctccaccaccacctattcactcaccccctccaccaatttactctccaccaccaccagttaactccccaccaccccccgtgtcctcaccacctccaccagtctattctccaccaccaccaccaatcaattctcctcctccaccaacacctgttctctctccatctcccttagtacattctccaccatcacctgtccactcacctcctccaccaatttactctccaccaccactagttaactccccaccaccccccgtgtcctcaccacctccaccagtctactctccaccaccactaccaatcaattctcctcctccaccaacacctgttctctctccatctcccctaatacattctccaccaccacctgtccactcacctcctccaccaatttactctccaccaccaccagttaactccccaccacccccc	2055	0.2496	MAYPCSNKALGCYLLFSIVISFFSTFSRAHFDHGFIHIEPIIFPNVDAYAPTLEFDTIAPTPKIEDDSQLAPPPEVGAIPPTFEVQNDAPLVNERLKKAYVALQAWKEAIYSDPLNTTGNWVGEDVCSYNGVFCAPAIDDPTLNVVAGVDLNNADIAGHLPEELGNLSDIALFHINSNRFCGIVPETLENLTLLHEFDISNNHFVGGFPSVVLKWPNLKYLDIRYNDFEGPLPPELFEKDLDAIFLNNNRFTSIIPDTLGKSKVSVVTFANNKFTGCIPKSIVNMKNMNEIVFMGNDLGGCLPQEIGLLESITVLDASHNGFVGTLPNLSGLKNVEVIDIEHNKLSGYVSNIVCQLPLLKNFTFSNNYFNGEAQTCVPSSNSLVALDDSKNCLSGRKNQKSSKQCLSVLTRPVDCSKHCGGGKGNDNVNSPPPHVSSPPPPTPMSSPPPPIYSPPPFVSSPLPPVNSPPPSMSSPLQPVNFPSPPHVSSPPPLVHTPPPPPVNSPLPLVSSPPPPIYSPPPPPINSPPPPTLILSPSALVHSPPPPIHSPPPPIYSPPPPVNSPPPPVSSPPPPVYSPPPPPINSPPPPTPVLSPSPLVHSPPSPVHSPPPPIYSPPPLVNSPPPPVSSPPPPVYSPPPLPINSPPPPTPVLSPSPLIHSPPPPVHSPPPPIYSPPPPVNSPPPP	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g01549	685	MobiDBLite	consensus disorder prediction	421	685	-	-
	Gma07g01549	685	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	609	685	-	-
	Gma07g01549	685	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	478	568	-	-
	Gma07g01549	685	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	73	425	-	-
	Gma07g01549	685	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	551	620	-	-
	Gma07g01549	685	Gene3D	Ribonuclease Inhibitor	96	262	IPR032675	-
	Gma07g01549	685	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	609	685	-	-
	Gma07g01549	685	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	478	568	-	-
	Gma07g01549	685	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	73	425	-	-
	Gma07g01549	685	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	551	620	-	-
	Gma07g01549	685	MobiDBLite	consensus disorder prediction	432	685	-	-
	Gma07g01549	685	Pfam	Leucine rich repeat N-terminal domain	101	134	IPR013210	-
	Gma07g01549	685	Gene3D	Ribonuclease Inhibitor	263	411	IPR032675	-
	Gma07g01549	685	SUPERFAMILY	L domain-like	101	395	-	-
	Gma07g01549	685	PRINTS	Proline rich extensin signature	464	485	-	-
	Gma07g01549	685	PRINTS	Proline rich extensin signature	485	501	-	-
	Gma07g01549	685	PRINTS	Proline rich extensin signature	431	447	-	-
	Gma07g01549	685	PRINTS	Proline rich extensin signature	502	519	-	-
	Gma07g01549	685	PRINTS	Proline rich extensin signature	452	464	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma07g01549	Gma-Chr7	22296770	22299109	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma07g01549	1	417	Trihelix Transcription Factor Family	AT3G19020	57.683	5.29e-172	514

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g01549	-		-	gsj:114419228	874.774