Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01534 ATGGGATCCAAAATTCTTCCAAAATGGGCATCGAAGCCTTGCTCCTATCTGATGACCTTTTCCATGTTAAGTTTTGCAGATGTTGATGTCATTGACCCACGGGAACTCTCCACTAAAATGCTTAAGAAAAATAAGATTAACTTGAATGAGATTTTACATAGCTCTGCCATGAGCCTCATTGACAAGGTACTGAAAATGGAAGTGCTTCTAACTGAGGTAAAAACCTTGCAACTTATATATACATTTGGAGATGCAAGGAAATATGAAATTAAGTTGCCTAATAGTTTTCCATCTATCAAATTTCCCATTGTCAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGGGACCATGCTTTAAGAGAATGGGTGCTTGATGAGACTGTTGAAAACATGCAGAGGTTTTTTGGATTTGCATATCTTGGAGATCCCCAAACCAAGTCCTGGCTAGAGGATCACAAACATCATATCTTTGGATTTCCATCATTAGCTGCAAAGGAATATTCAGTTATCTGGATCTGGGGTGGTGTGGTGGAGTTAGCCTTCAATTGTACTTTCTTCCACTTTAGATCTGTGATTCAGCTTATAGCATGTGCAAGTAACATCTACTACATAAATGACCACTTGGATAAACGAACTTAG 639 0.3881 MGSKILPKWASKPCSYLMTFSMLSFADVDVIDPRELSTKMLKKNKINLNEILHSSAMSLIDKVLKMEVLLTEVKTLQLIYTFGDARKYEIKLPNSFPSIKFPIVSGASIVAKVTRDHALREWVLDETVENMQRFFGFAYLGDPQTKSWLEDHKHHIFGFPSLAAKEYSVIWIWGGVVELAFNCTFFHFRSVIQLIACASNIYYINDHLDKRT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01534 212 PANTHER RIBONUCLEASE 27 165 - -
Gma07g01534 212 PANTHER RIBONUCLEASE H2 SUBUNIT A 27 165 IPR001352 GO:0003723|GO:0004523
Gma07g01534 212 Pfam Ribonuclease HII 30 153 IPR024567 GO:0004523
Gma07g01534 212 SUPERFAMILY Ribonuclease H-like 26 168 IPR012337 -
Gma07g01534 212 Gene3D - 17 129 IPR036397 GO:0003676
Gma07g01534 212 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 1 179 IPR024567 GO:0004523
Gma07g01534 212 Gene3D Ribonuclease hii. Domain 2 130 170 IPR023160 GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01534 Gma-Chr7 22009759 22014008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01534 5 182 Core DNA Replication Machinery Family AT2G25100 39.592 3.57e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01534 K10743 - gmx:100779875 230.72