Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01484 ATGGAAAAGGTGGCTCCGCCTCCGATTCTGATGCACCGGAAGCGCGATCTATCGTACGACGTCGTTTCGGCGGGTCCGAACGAGAGCTGGAGGTGGGAGTGGGACAGCGTGCGTTTCGCAGGAAAACCACCGCCGCCGCCACCACTGTCCCCAAACAACGACGTCGTTTTCGAGGCGGAAAGTGTCGTTCCTCCTCTACAGTTAAAGCTCGGAGGAACAACAAGAGTGAATAACAATAACATCAATATCAACGTTAGCAACAAGAGAGTTAGGTCGGGGTCCCCCGGAACGGCGTCGTATCCGATGTGCCAGGTGGACAACTGCAGGGAGGATCTGTCGAAGGCGAAGGACTATCACCGGAGGCACAAGGTGTGCGAGGCTCATAGCAAAGCCTCGAAAGCGCTTCTCGCGAATCAAATGCAAAGATTCTGCCAGCAGTGTAGTAGGTTTCACCCGCTCTCGGAGTTCGATGAGGGGAAGCGGAGCTGCCGCCGGAGACTCGCCGGACACAACCGGCGCCGGCGGAAGACGCAGCCGGAGGATGTTACCTCGGCGACTCCCGCGCCTGCTGCCGCCGCGAATTTGGAAATCTTCAACTTGTTGACTGCTATAGCTGGAGCTTCGCAGGGAAAATTTGAGGAAAAAAGGTCACAAGTTTCGGATAGAGAGCAGCTTGTTCAGATTCTCAATAAGATACCTTTGCCTGCAGATCTTGCAACCAAGTTGCTGGATGCTGGGAGTGGTAATGTTAATGGGAAAAAGGATCATGTGCAATTGCAGACACCATCATCCTCCTATCAATGTCACGAGTCTCATGACCTACTGAACCACACCCCGGCTGCCCCGTTAACTATGGACTTGCTTGCTGTTCTTTCCACCACTCTTTCTGGGGGTTCTGCCCCTGATTCCAGTGCGTCACCCTCTCAAAACCGCAGCTGCAGCAGTGATGGTGGCAGTGCTGACCAGACGAGACAACAGCAATTCTTTTCGGTTGGTGGAGAAAGAAGCAGTAGCAGTTCCCAGTCTCCAGTTGAAGATTCAGATTGTCAAGAAGTTCGAGTTAATTTACCACTGCAACTCTTTAGCTCCTCTCCGGAAGATGACAGCCTGCCTAAACTAGCATCTTCTAGAAAGTATTTCTCGTCTGACAGTAGTAACCCTGCTGAAGAGAGATCGCCATCGTCTTCTCCTCCTATTGTGGAGATGCAGTTTGATTTGCAGGATGGGGCTAGAGGTCTCAAGCCAGAGAGTATATCCTCTGGAAGAGGAGTTAATGCAAATAAGGAAGCCAGCCAAAGTCATAGTTCTAATATCTCTCTTGATCTATTTAAAGGGTCAAATAACAGGATCCAACAACCTAGTTCACTTCAAAGTGTTCCATTTCAAGCTGGGTATACATCTTCGGGCTCTGATCATTCACCTCCCAGTTTGAATTCAGATGCTCAGGATCGCACTGGGAGAATAATGTTTAAACTATTTGACAAGCATCCCAGCCATTTCCCAGGAACACTGCGAGCACAGATTTACAATTGGCTATCCAATAGGCCATCAGACATGGAGAGCTACATACGGCCTGGTTGTGTGGTCCTATCAATTTATGCTTCAATGTCTTCTGCTGACTGGGAGAGATTAGAAGAAAACTTCCTTCAACATGTTCATTCTTTAATTCAAAATTCAGATTCTGATTTTTGGAGAAATGGAAGGTTTCTGGTTCATTCTGGCAGTCGGTTAGTTTCACACAAAGATGggaagattcgcatatgcaaaccatggagaacatggaagtctccagagttgatatctgtgtcccctttggcaattgttagtggacaggaaacctctatttcattGAAGGGTAGAAACTTGTCAACTCTTGGCACAAAGATTCACTGTACAGGTACTGGCTCTTATGCATCAGCAGAAGTCATAGGTTCTGCACATTCTGGTGTGATGTATGATAAGATAAAGTTGAGTGGTTTTAAAGTTCAGGATGTATCGCCTGGTGTTCTGGGTCGCTGTTTTATTGAGGTTGAAAATGGTTTCAAGGGTAACAGTTTTCCAGTGATAATAGCTGATGAGACCATTTGCAAGGAATTGAGACCACTTGAGTCTGAATTTGATGAGGAGGAAAAAATATGTGATGCCATTTCAGAGGAGCATGAACATCATTTTGGAAGGCCGAGATCAAGGGAGGAGGCTTTGCACTTCTTGAATGAGCTTGGCTGGCTGTTCCAAAGAGAAAGATTCTCTTATGTGCATGAGGTTCCATGTTATTCACTTGACAGGTTCAAATTTGTACTCATATTTGCTGTGGAAAGAAACTGTTGCATGCTAATCAAAACCCTTCTGGATGTGCTGGTTGGTAAACACTTGCAAGGGGAATGGTTGTCAACGGGGTCAGTGGAGATGTTGAATGCAATCCAACTCTTAAATAGAGCAGTGAAAGGAAAATACGTAGGCATGGTTGATTTGCTCATCCACTATTCTATACCAAGCAAAAATGGTACATCCAGGAAATATGTATTTCCACCAAATCTTGAGGGTCCTGGTGGTATTACACCCTTGCACTTGGCGGCATGCACATCTGGTTCTGAGAGTGTAGTTGACTCTTTAACAAGTGACCCACAGGAGATTGGTTTGAAGTGCTGGGAATCCCTTGTGGATGCAAACGGACAAAGTCCACATGCCTATGCCATGATGAGGAATAATGACTCTTATAATGCGCTGGTCGCCCGTAAACTTGCTGACAGACAAAGGGGTGAAATTTCGGTAACAATTGCAAATGCAATAGAGCAACAGTCACTGAGAGTGGAGCTTAAGCAAAAGCAAAGTTACTTAGTCAAACGAGGTCAGAGTTCTTGTGCCAAGTGTGCGAATGCAGAAATTCGCTACAACAGAAGAGTTCCAGGTTCACATGGTTTGCTTCACCGCCCCTTTATTTATTCAATGCTAGCTGTTGCAGCTGTTTGTGTATGTGTTTGTGTGTTCTTCCGTGGTCGCCCTTTCGTAGGCTCAGTTGCTCCCTTCAGTTGGGAAAATCTGGATTATGGCACAATTTGGAATGGAATGTGGAATTGTGGCCACAAAGCACAAACAATTATGAAAGCAGTAAGCATTGGGAATAAAGAGAATTGTGATTGTTATCCCGTCAGCCTGCTACATCCTTCCAATGCAAGACGTTCAAGTTAG 3189 0.4497 MEKVAPPPILMHRKRDLSYDVVSAGPNESWRWEWDSVRFAGKPPPPPPLSPNNDVVFEAESVVPPLQLKLGGTTRVNNNNININVSNKRVRSGSPGTASYPMCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALLANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSATPAPAAAANLEIFNLLTAIAGASQGKFEEKRSQVSDREQLVQILNKIPLPADLATKLLDAGSGNVNGKKDHVQLQTPSSSYQCHESHDLLNHTPAAPLTMDLLAVLSTTLSGGSAPDSSASPSQNRSCSSDGGSADQTRQQQFFSVGGERSSSSSQSPVEDSDCQEVRVNLPLQLFSSSPEDDSLPKLASSRKYFSSDSSNPAEERSPSSSPPIVEMQFDLQDGARGLKPESISSGRGVNANKEASQSHSSNISLDLFKGSNNRIQQPSSLQSVPFQAGYTSSGSDHSPPSLNSDAQDRTGRIMFKLFDKHPSHFPGTLRAQIYNWLSNRPSDMESYIRPGCVVLSIYASMSSADWERLEENFLQHVHSLIQNSDSDFWRNGRFLVHSGSRLVSHKDGKIRICKPWRTWKSPELISVSPLAIVSGQETSISLKGRNLSTLGTKIHCTGTGSYASAEVIGSAHSGVMYDKIKLSGFKVQDVSPGVLGRCFIEVENGFKGNSFPVIIADETICKELRPLESEFDEEEKICDAISEEHEHHFGRPRSREEALHFLNELGWLFQRERFSYVHEVPCYSLDRFKFVLIFAVERNCCMLIKTLLDVLVGKHLQGEWLSTGSVEMLNAIQLLNRAVKGKYVGMVDLLIHYSIPSKNGTSRKYVFPPNLEGPGGITPLHLAACTSGSESVVDSLTSDPQEIGLKCWESLVDANGQSPHAYAMMRNNDSYNALVARKLADRQRGEISVTIANAIEQQSLRVELKQKQSYLVKRGQSSCAKCANAEIRYNRRVPGSHGLLHRPFIYSMLAVAAVCVCVCVFFRGRPFVGSVAPFSWENLDYGTIWNGMWNCGHKAQTIMKAVSIGNKENCDCYPVSLLHPSNARRSS 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01484 1062 MobiDBLite consensus disorder prediction 167 187 - -
Gma07g01484 1062 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 29 1019 - -
Gma07g01484 1062 MobiDBLite consensus disorder prediction 295 435 - -
Gma07g01484 1062 MobiDBLite consensus disorder prediction 420 435 - -
Gma07g01484 1062 MobiDBLite consensus disorder prediction 356 401 - -
Gma07g01484 1062 ProSiteProfiles Zinc finger SBP-type profile. 100 177 IPR004333 GO:0003677
Gma07g01484 1062 SUPERFAMILY SBT domain 101 181 IPR036893 GO:0003677|GO:0005634
Gma07g01484 1062 SUPERFAMILY Ankyrin repeat 766 914 IPR036770 -
Gma07g01484 1062 Gene3D - 93 164 IPR036893 GO:0003677|GO:0005634
Gma07g01484 1062 Pfam SBP domain 103 176 IPR004333 GO:0003677
Gma07g01484 1062 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 1019 IPR044817 GO:0003677
Gma07g01484 1062 Gene3D - 761 959 IPR036770 -
Gma07g01484 1062 MobiDBLite consensus disorder prediction 451 481 - -
Gma07g01484 1062 MobiDBLite consensus disorder prediction 295 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01484 Gma-Chr7 20560432 20566651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01484 8 1019 SBP-box Gene Family AT1G20980 52.642 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma07g01484 SBP 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01484 - - gmx:100819004 1975.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01484 07 20560432 20566651 Gma20g00055 20 640393 646462 GST