Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01478 ATGGGAGGGTGGAGCCATGCCCGAGCACTTTCAAGTTTGCCAAGTGCGTCATTTATAATTCCAAAGACTACTTTTGCTGGGGAAGTAATTGTCAAAGTGGCATGTGGAACAAATCATACAGTGGTGGTGGATAAGAATGGCTTCGTCTACACGTGGGGTTTTGGTGGTTATGGAAGGCTAGTACATAGGGAGCAGAAGGATGAGCGTGTCCCACGACGTGTTGAAGTTTTTCAAAATAGAAATGTTTTGCCACTCGATGCAATCATATCAACAGGTTTTGTGAATTCTTCATGTACTGCAAAGGTGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGCTGCAAGATCAATTCAGTGTCAAAGTCAACCATGTCCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGAACCCCTTCTACCATTGACCAGAGTATACAACTCGGACAACATTTGAACGACCATTACTCAATGGGGGTGGCCTATGCACAAAGAGTAGTTAACTCAGAGAGGGGAACATTTGAGAAGCAACACGGATGGGTTATAAAGACAATAGAAAGAGAGCCTTCACTAGTTAGAGATGAGTATGCACCGATGATATTTGCACAAGAAACAATCTCTTACCTTGAATCTCTTGATATGATGTTCAGGGACATGCAAGAGGACCGAGAGAATATTTTCATGGCTAGGGCCACTAGGAAAGTTGTTCTCACTAGTCCTTTTAATTTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTATAAATCTAAGCTCCCTCCAAAGCCAACAATGGAAGAGTGCATTAAAGCAACTGTAGGATATGTTGGAGGATCCTTTGATGTTGAGTCCCTCATGGAGAATTTAGTTGGTCAACTTACTGGTCACGAAGCAATTTTGGTGAATGTATATGATATCAAGAATTCTACTAACCCCTTAATCATGTATGGAAACCAAAACAAAGAAGGTGATATGTCTCTTGTCCATGAAACCAGTGAATCTTATGAGCAAGTCACCTTGATGGTCAGCATGGAGGGCACTGGAATTGGAATTCCTTTCTTAGCCAAAGATAGGATTTTCATGCCTTTTGTGCAGGCAGACAACTCAACATCTCAACATTATGGTGGTACTGGCATTGGCTTGAGTTTCAGTAAATGCCTGGTTAAACTAATAAGTGGTGAGATAAGTTTCATAAGCCAACTACAGGTTGGGAGCACATTTTCATTTACTGTAGATTTTGGAACGATTGACAAAAATGCAATAACTGACATGAAGAAACATAATTTGGAAGATCTGCCTCCCAATTTTAGATGGCTTAAAGCCATAGTGGTTGATGGAAAACCTATTAGAGCATCAGTGACTGGATACCATTTGAAGAGACTAGGGATACAAGCTAAAGTTGCAAATATCATGAATAAGGTTTTGCAAGAGCAATATGACACTGAAAGCATTGCTCAACATGGAGTTGAATTGTTGTATGCAACTATGACAAAGATATTTAGTTCATTGCAAGAACCATGCAAAGAAACAAATGCAGTGAATGCAACAATGCTAGAAGTGGTGTTGGTTAGGAGAACCCTTGCTTGGGTAACAAGAATTATATTGCTCATTTCAATCCTTATGGGGGCTTGCAAACCAATCCTCCAGAAAGGAATCGTTGAGAAAAATATCATACTTGAAACTGATCCAAATGTTATAGCTGGGAAAGTTGCTAGTAATAGTATAGATTCTGGAGCTCCTTTGTCCGAACATACACTAAGTCAAGCATTGGCCACAGCCAGGGAACATCGTGCAAGGTCCATTCTTAAATGA 1827 0.4056 MGGWSHARALSSLPSASFIIPKTTFAGEVIVKVACGTNHTVVVDKNGFVYTWGFGGYGRLVHREQKDERVPRRVEVFQNRNVLPLDAIISTGFVNSSCTAKVLGSLCDQRARMLQDQFSVKVNHVHALAILVSTFHYYRTPSTIDQSIQLGQHLNDHYSMGVAYAQRVVNSERGTFEKQHGWVIKTIEREPSLVRDEYAPMIFAQETISYLESLDMMFRDMQEDRENIFMARATRKVVLTSPFNLLGSHHLGVVLTFPVYKSKLPPKPTMEECIKATVGYVGGSFDVESLMENLVGQLTGHEAILVNVYDIKNSTNPLIMYGNQNKEGDMSLVHETSESYEQVTLMVSMEGTGIGIPFLAKDRIFMPFVQADNSTSQHYGGTGIGLSFSKCLVKLISGEISFISQLQVGSTFSFTVDFGTIDKNAITDMKKHNLEDLPPNFRWLKAIVVDGKPIRASVTGYHLKRLGIQAKVANIMNKVLQEQYDTESIAQHGVELLYATMTKIFSSLQEPCKETNAVNATMLEVVLVRRTLAWVTRIILLISILMGACKPILQKGIVEKNIILETDPNVIAGKVASNSIDSGAPLSEHTLSQALATAREHRARSILK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01478 608 PANTHER TWO-COMPONENT HISTIDINE KINASE 99 336 - -
Gma07g01478 608 Pfam Regulator of chromosome condensation (RCC1) repeat 46 82 IPR000408 -
Gma07g01478 608 SMART HKATPase_4 282 420 IPR003594 -
Gma07g01478 608 PANTHER TWO-COMPONENT HISTIDINE KINASE 337 488 - -
Gma07g01478 608 SUPERFAMILY RCC1/BLIP-II 14 83 IPR009091 -
Gma07g01478 608 Pfam CHASE domain 155 321 IPR006189 -
Gma07g01478 608 PRINTS Bacterial sensor protein C-terminal signature 363 373 IPR004358 GO:0016310|GO:0016772
Gma07g01478 608 PRINTS Bacterial sensor protein C-terminal signature 380 398 IPR004358 GO:0016310|GO:0016772
Gma07g01478 608 PRINTS Bacterial sensor protein C-terminal signature 345 359 IPR004358 GO:0016310|GO:0016772
Gma07g01478 608 PRINTS Bacterial sensor protein C-terminal signature 404 417 IPR004358 GO:0016310|GO:0016772
Gma07g01478 608 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 344 416 IPR036890 -
Gma07g01478 608 Gene3D - 11 98 IPR009091 -
Gma07g01478 608 SMART CHASE_2 140 323 IPR006189 -
Gma07g01478 608 PANTHER HISTIDINE KINASE 4 337 488 - -
Gma07g01478 608 PANTHER HISTIDINE KINASE 4 99 336 - -
Gma07g01478 608 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 418 IPR003594 -
Gma07g01478 608 Gene3D - 99 143 - -
Gma07g01478 608 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 33 43 IPR000408 -
Gma07g01478 608 Gene3D CHASE domain 152 350 IPR042240 -
Gma07g01478 608 ProSiteProfiles Histidine kinase domain profile. 345 420 IPR005467 -
Gma07g01478 608 ProSiteProfiles CHASE domain profile. 161 323 IPR006189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01478 Gma-Chr7 20263022 20275103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01478 343 472 Histidine Kinase Gene Family AT2G01830 62.595 1.81e-44 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01478 K14489 - gmx:100789894 385.185