Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01470 ATGAGAGGAGGTATTTGTAGCATACAGCTTCAGCCTCTTACACTTGAAGCTACAACTGTTGTCAAGCAAGCTGTGAATCTTGCAACAAGAAGAGGCCATGCGCAAGTGACACCTCTTCATGTTGCAAGTGCCATGCTTGCAACTTCCACAGGCCTTCTTCGTAAGGCTTGTCTTCAGTGTCACTCTCATCCTCTTCAGTTCAAGGCTCTTGAGCTTTGTTTCAACGTTGAACTCGACCCTTTACCAGCTTCCACTTCAAGCCCTCTTCTAGCTCCTCAATATTCCACCCCTTCACTCTCCAATGCCTTGGTTGCAGCCTTCAAACGTGCTCAGGCTCACCAACGTCGTGGTTCTATTGAGAACCAGCAGCAACATATTCTTGCCTTGAAGATCAAGGTGGAGCAGCTCGTGATTTCAATCCTTGATGACCCTAGTGTTAGTAAGGTCATGAGAGAAGCTGGTTTCTCTAGCACCCTTGTGAAAACAAGGGTTGAACAAGCTGTTTCAATGGAAGTTTATTCAAAAAAGGCTTCTTCTGATAGGAGCCATGCCAAAGAAAATATCACCAAGCCCCATCATGTTGTTCTTGGTGGTAGTAATAATGTGTCTCCATCATCTGGACCTTTTGGTCAAGTTACTGCTGGCTCCTTCACGAAGCCTAATTTAGACCATGTTAACAATGATGATGTAACTAGTGTGCTAAGTGAGTTGGTGAGGAGAAAAAACACAGTTATTGTAGGGGAGGGTGTGGCCAATGCTGAGGGAGTAGCTAAGGAGGTGATGGAGAGGTTTGAGGTAGGGAATGTTCATAGGGACTTAAGGTATGTGCAATTTGTGAGCCTTCCTCTCATGTGCTTCAGAAACATTAGCAAGGAGGAGGTTGAACATAAGCTTATGGAGATTAGAAACCTAGTGAAGAGTTGTGTGGGAAAAGGGGTTGTTCTTTACTTGGAGCAAATGGTCATGGAGCTTAAAAATTTGGTATGTGGTAGTGGGGAGTCTAGTAGACTGTGGCTTATGGGGATTGCAACTTTTAAGGCATACATGAAGTGTAAAATGTGTCACCCATCCCTAGAAGCTATTTGGGAGCTTCACCCCTTCACAATTCCTGTTGGCAGCCTCAGCCTAAGTTTAAATTTTCACAGTGATTTTCAAGCTCAAGAGAGAAGCAAGCTGTTTTTCAAGGATGTGGCTTTTGAAGATAGAACAGGAGTCAGAAACCATCTAACTTGCTGCAGGGATTGCTTGATAAATTTTGAAAAAGAAGCTCAAAGCATAACTAACTGTATAAGGAAGAAATTTTGCCCTGCTAGTAGCTTGCCAACATGGCTTCAAAATTGTAAGGAAGAGAGAAGTGACATAATGGAAGATCAGCCACGAGATTGTGCTCTTGGATCTGACATTAAAATCAACATGGTTACTTCAAAAAAATCTTGTCCCAAATATGTTAGCTTGCCAGAATCTGTATCAGTGGTATCTTACCATAAGTTGTTCCTTTTGTACAAGCTTCTTTTGGCAAATCCTGGGCCAGCAGTGACAGACAAGCTTTATGCATCTAGTTTTGCCAACACGATTGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGTTGGTTGAGGACCCTTGA 1650 0.4327 MRGGICSIQLQPLTLEATTVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQCHSHPLQFKALELCFNVELDPLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRGSIENQQQHILALKIKVEQLVISILDDPSVSKVMREAGFSSTLVKTRVEQAVSMEVYSKKASSDRSHAKENITKPHHVVLGGSNNVSPSSGPFGQVTAGSFTKPNLDHVNNDDVTSVLSELVRRKNTVIVGEGVANAEGVAKEVMERFEVGNVHRDLRYVQFVSLPLMCFRNISKEEVEHKLMEIRNLVKSCVGKGVVLYLEQMVMELKNLVCGSGESSRLWLMGIATFKAYMKCKMCHPSLEAIWELHPFTIPVGSLSLSLNFHSDFQAQERSKLFFKDVAFEDRTGVRNHLTCCRDCLINFEKEAQSITNCIRKKFCPASSLPTWLQNCKEERSDIMEDQPRDCALGSDIKINMVTSKKSCPKYVSLPESVSVVSYHKLFLLYKLLLANPGPAVTDKLYASSFANTIGEDKIFLTVAEAVAYCSPKLVEDP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01470 549 Gene3D STAS domain 497 545 IPR036513 -
Gma07g01470 549 ProSiteProfiles Clp repeat (R) domain profile. 8 171 IPR004176 -
Gma07g01470 549 SUPERFAMILY Double Clp-N motif 13 163 IPR036628 -
Gma07g01470 549 Pfam Clp amino terminal domain, pathogenicity island component 24 55 IPR004176 -
Gma07g01470 549 Pfam Clp amino terminal domain, pathogenicity island component 131 168 IPR004176 -
Gma07g01470 549 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 472 - -
Gma07g01470 549 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 472 - -
Gma07g01470 549 Gene3D - 9 170 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01470 Gma-Chr7 20023329 20027530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01470 502 548 Inorganic Solute Cotransporters AT1G22150 65.957 7.87e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01470 - - gmx:100818716 827.78