Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01466 ATGGGGATGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGGCCTTCTCGCATAAGTGCCACCACGATTATATTCTATACATTGACTCTTGTCATGCTTGTGTTTATCCTGTTTGTAACATACAGACATTGGTCCAACAGGTTGAAACTACTTTTTCTGCAGGATGAAAATACATCTGTAGAATCCAAAAAATCTGATCTACCTGGATATGCTGTTGTAATTACCTCTAAAGGTTCTATTATAGTAGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATAGATTTATGTCAAAAAGGGCACTTCAAGGGAATGCTTTTTCACCAAGTAATTAAGCACTATGTGATTCAGGCAGGTCATAACAAGGGGCCTGGAGCTACTGAAGATTGGAACCTGTTAGGAAAAAAATATGCAAGTATGAGACATGAAGCATTCATGCTTGGAACATCAAAGGGAAAATACTTTAACAAAGTATTTGATCTTTTCATCACAACTGCACCAATACCAGATCTAAATGAAAAGCTTATTGTGTTTGGCCGAGTCATCAAGGGACAGGATATTGTTCAGGAAATTGAAGAAGTGGATACAGATGAGCATTACCAACCAAAAGTTTCCATTGGGATACTTGATGTGGCTCTTAAACAGCTGGAGTGA 675 0.3852 MGMIKPQALLQQSKRKKGPSRISATTIIFYTLTLVMLVFILFVTYRHWSNRLKLLFLQDENTSVESKKSDLPGYAVVITSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHQVIKHYVIQAGHNKGPGATEDWNLLGKKYASMRHEAFMLGTSKGKYFNKVFDLFITTAPIPDLNEKLIVFGRVIKGQDIVQEIEEVDTDEHYQPKVSIGILDVALKQLE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01466 224 Gene3D - 58 223 IPR029000 -
Gma07g01466 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 223 - -
Gma07g01466 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 223 - -
Gma07g01466 224 SUPERFAMILY Cyclophilin-like 72 219 IPR029000 -
Gma07g01466 224 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 82 220 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 77 218 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 88 103 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 179 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Gma07g01466 224 CDD cyclophilin 79 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01466 Gma-Chr7 19872748 19877068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01466 73 220 U-box Gene Family AT5G67530 27.097 1.04e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01466 - - gmx:100797505 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01466 07 19872748 19877068 Gma20g00046 20 553841 560261 GST