Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma07g01462 | ATGGCCAACAAGGTTTGCACTATGAGAAATGTACTCGCACGATGGTACCGAGGTAATTGTCTCTTCTCTGGTGCGACTCTGCCTTCGTTTCCAACTCTGAACTCCTCCGATGCGGTGGGGATGGGTACCTACAAAGGAACTCCGATGCTCAAGTTAGAGCTCTGTCCCAAAAGTTGTAAACGAGACTTCTTGGATGCCTTCGAGGTCCACACCTGTCCAACGGGTGTTTGGCTTAGGCCGAGGGGTATTTGGCTAAAGCTGAAGGCACTCCACTTGGCTTTAATCCGTGTAACAATGTCTTCTCAAGGTTATGGCGTTCACTTTTTCAAGGTTATTCTTGAAAGCACCCTTCGAAAAGGACAACTGAAAGTGCCCTCAAGTTTTACCAGAAGACATTGGCAAGGAATTTCAAATCCTGTTATTCTAAGTCTTCCAAATGGCACCAAAAGGAAAGTTTATTGGCTGAAAGATGGTTGTGATGTTTGGTTTTCCAATGGTTGGAGAGAATTTGCAAAAAAATTGCGTTTGGATGTGTCACATTTTGTGGTGTTTCGATACGAAGGCAATTCTTGCTTTAACGTGATTATTTTTGGTAAAAGTGCTTTGGAAGTAGAGTACCCTTCAAGCCATGATTCTAATGTAGAAGTGGAAGAGATTAATGATACTGATTTTTCTGCGAAATTTGGTGAAGATCATACGAGTAAAAGTAGTAAGAAGAGAAAAATCATCCCCAAAGAAGAAGAAGATGATGATGATGATGAACCTAAGCATTGCAAGAAGGATAGTGGATTTGATTATTCTAAGCAAAAGAACGATGGTTGGTTTTATTTTCTCATTTTGTTCCGTAGTAGCCAAGGAGATTTCAAGAGGAGAATCAAAATGTTTCACGAGAAAGTGAAGGAAATGTTCTACGCTGAGAATGAACATTTCACATGTTTAATCCAAAAGACATACACGGAAAGAGATCTCTTGATCTTACCTATGGAATTTTCCAAACCATATCTGCACAAGGAAGGAAATGCTACGCTTTTTGTTGACGATGGCAGATCTTGGGATGTTGGGTTAAGGGTCAATCACTATGGACAATTGACATTTTCCAGAGGCTGGAGAAAATTTTCGTTAGAGAATAAATTGAAAGTAGGTGATGTTTGTGGTTTTGAGCTACACAATAGTGAAAAATTTTCATTCGAAGTTTCTATTTATCGTCTCGAAGAGAATTCTAGCACTCCCATCTTCAAAGGTAGTCATGAACAAAGACTTTCTAATATGCCTTCTTCATCCTTTAGAACTCCTGTGACCCCTAATGCTAGTACATCTAAGTCGAAGGATGATCTCTGCATCTTTATTAAGTCTTCAAATTTACCGTGCCAAACAATATCATTTAAATACATCAGGAGCTACGTTAACGAGAGTTGCAGTGAAATCCATGGAAGACTCGTGACCCTTCGTGTTGGGTGTAGAGCGTGGCAAGTGAAATTGCTCTGTTACAATGCAAATTCCTTTGCTAGATTCTCTAGTGGGTGGCCCGAATTTGCCAGGGAGTGTGACTTGAAACCGGGGGATGTCTGTATCCTTAAGATGATAGATGTGAAAAAACTAGTGTTCGAAGTTTCATGTTTGAAAGGAAAAATTTCTAGAGAAGAGAATGAAGTATATAAGTAG | 1662 | 0.3989 | MANKVCTMRNVLARWYRGNCLFSGATLPSFPTLNSSDAVGMGTYKGTPMLKLELCPKSCKRDFLDAFEVHTCPTGVWLRPRGIWLKLKALHLALIRVTMSSQGYGVHFFKVILESTLRKGQLKVPSSFTRRHWQGISNPVILSLPNGTKRKVYWLKDGCDVWFSNGWREFAKKLRLDVSHFVVFRYEGNSCFNVIIFGKSALEVEYPSSHDSNVEVEEINDTDFSAKFGEDHTSKSSKKRKIIPKEEEDDDDDEPKHCKKDSGFDYSKQKNDGWFYFLILFRSSQGDFKRRIKMFHEKVKEMFYAENEHFTCLIQKTYTERDLLILPMEFSKPYLHKEGNATLFVDDGRSWDVGLRVNHYGQLTFSRGWRKFSLENKLKVGDVCGFELHNSEKFSFEVSIYRLEENSSTPIFKGSHEQRLSNMPSSSFRTPVTPNASTSKSKDDLCIFIKSSNLPCQTISFKYIRSYVNESCSEIHGRLVTLRVGCRAWQVKLLCYNANSFARFSSGWPEFARECDLKPGDVCILKMIDVKKLVFEVSCLKGKISREENEVYK | 553 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma07g01462 | 553 | MobiDBLite | consensus disorder prediction | 227 | 264 | - | - | |
Gma07g01462 | 553 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 456 | 539 | - | - | |
Gma07g01462 | 553 | MobiDBLite | consensus disorder prediction | 414 | 440 | - | - | |
Gma07g01462 | 553 | CDD | B3_DNA | 107 | 197 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | CDD | B3_DNA | 458 | 541 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 105 | 403 | - | - | |
Gma07g01462 | 553 | ProSiteProfiles | B3 DNA-binding domain profile. | 487 | 543 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | SUPERFAMILY | DNA-binding pseudobarrel domain | 107 | 207 | IPR015300 | - | |
Gma07g01462 | 553 | SMART | B3_2 | 314 | 404 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | SMART | B3_2 | 445 | 543 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | SMART | B3_2 | 108 | 200 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | Gene3D | - | 424 | 542 | IPR015300 | - | |
Gma07g01462 | 553 | Gene3D | - | 291 | 406 | IPR015300 | - | |
Gma07g01462 | 553 | Pfam | B3 DNA binding domain | 108 | 197 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | Pfam | B3 DNA binding domain | 310 | 402 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | CDD | B3_DNA | 313 | 402 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | Gene3D | - | 102 | 201 | IPR015300 | - | |
Gma07g01462 | 553 | PANTHER | B3 DOMAIN-CONTAINING | 456 | 539 | - | - | |
Gma07g01462 | 553 | PANTHER | B3 DOMAIN-CONTAINING | 105 | 403 | - | - | |
Gma07g01462 | 553 | SUPERFAMILY | DNA-binding pseudobarrel domain | 306 | 402 | IPR015300 | - | |
Gma07g01462 | 553 | ProSiteProfiles | B3 DNA-binding domain profile. | 107 | 200 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | ProSiteProfiles | B3 DNA-binding domain profile. | 309 | 404 | IPR003340 | GO:0003677 | |
Gma07g01462 | 553 | SUPERFAMILY | DNA-binding pseudobarrel domain | 457 | 541 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma07g01462 | Gma-Chr7 | 19744988 | 19750796 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma07g01462 | 108 | 405 | B3 DNA Binding Superfamily | AT3G18990 | 25.148 | 2.12e-24 | 103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Gma07g01462 | B3 | 8.2e-15 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma07g01462 | - | - | vra:106753565 | 407.142 |