LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g01457	ATGGGTGGTCTTTTTGAGGCTATAACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGAAAGGTTGAAAGAAAAATCCCCGAAGATGATCCAAGAAATCCAGCTAGAAGGCAGTATGACAGTGCTGGATTTGAGCTTTTTGACGTTTTCATTCACATTCTTCATGATATAGTTCTATTTGAAATGCAACAATCTTTAAGATGTTCTACCTATACTTATCAGGCCCTTGATGCGGATAGCATGGACATGGAAATTGATTTATCTAATCTTGGGACTGTGAACACAATGTTTACAGCTTTATTCAGGTGTGCATTTTATTGCATGACTATTTGTTTTCAAAATTATTTTGCTTTGTTTCTGATTCTATTTTGTTACAGCAAAATGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGAACAGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTATAGAATGGATTCGACGGTGAATGCGTGCTATGTGCAGTTAGCAATGGCCAAGGATCCTGAAGGGGCCTTCTTTAAAAGGTTGGAAGGTCTTCAGCCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGTCTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCATATGAAGATACCACCCAAAAACTGAAGGACATTGAAGCTCAAATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGCCAGCACCAGCTGTTACCATTTACTTTTCAAGAGGTCCTTCAGCAAGCTATCATGGGGTCTTGAAGCCTGACATAATGGCACCTAGCTCTAATGTTCTTGCTGCTTATGTTCCTACAGAACTAGTAGCAACAATTGGCAACAAGGTGATGTTATCTAGTGGCTACAATTTGCTGTCTGGAACATCCATGGCATGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACACTAAATGGAGTGCTGCTGCTATAAGGTTTATGTCAACAAAAGTCGGAAGGAGTTGA	1161	0.4031	MGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERKIPEDDPRNPARRQYDSAGFELFDVFIHILHDIVLFEMQQSLRCSTYTYQALDADSMDMEIDLSNLGTVNTMFTALFRCAFYCMTICFQNYFALFLILFCYSKMGVPIKTTISANVLEEALNGTEDSEKTGKVTSAGMYFLHFQVYRMDSTVNACYVQLAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKSASYMIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFEAEYRKPAPAVTIYFSRGPSASYHGVLKPDIMAPSSNVLAAYVPTELVATIGNKVMLSSGYNLLSGTSMACPHASGVAALLKAAHTKWSAAAIRFMSTKVGRS	386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g01457	386	PANTHER	CHAPERONE PROTEIN DNAJ 15-LIKE	93	123	-	-
	Gma07g01457	386	PANTHER	CHAPERONE PROTEIN DNAJ 15-LIKE	145	169	-	-
	Gma07g01457	386	Coils	Coil	259	286	-	-
	Gma07g01457	386	ProSitePatterns	Serine proteases, subtilase family, serine active site.	349	359	IPR023828	-
	Gma07g01457	386	Gene3D	Peptidase S8/S53 domain	288	377	IPR036852	GO:0004252\|GO:0006508
	Gma07g01457	386	PANTHER	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	170	290	-	-
	Gma07g01457	386	PANTHER	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	145	169	-	-
	Gma07g01457	386	SUPERFAMILY	Subtilisin-like	294	377	IPR036852	GO:0004252\|GO:0006508
	Gma07g01457	386	Pfam	Subtilase family	297	377	IPR000209	GO:0006508\|GO:0008236
	Gma07g01457	386	Pfam	Inorganic H+ pyrophosphatase	5	56	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Gma07g01457	386	PANTHER	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	93	123	-	-
	Gma07g01457	386	Gene3D	-	245	287	-	-
	Gma07g01457	386	PANTHER	CHAPERONE PROTEIN DNAJ 15-LIKE	170	290	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma07g01457	Gma-Chr7	19657732	19661109	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma07g01457	3	127	Primary Pumps ATPases	AT1G15690	50.758	2.11e-28	115

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g01457	-		-	gmx:100777978	258.455