Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01449 ATGACCGTTACTTTTTTCATCTTTCTTCTCTACTTCTTTTTTCATCCCGCCGTTTCTCTCTCCTCCGACGGCATCGCGCTTCTCACTCTGAAGTCCGCCGTGGACGCCCCCGGCGCTGCCGCGTTCTCCGACTGGAACGACGCCGACGCCACGCCGTGCCGGTGGTCCGGCGTCACGTGCGCGAACATCTCCGGGCTCCCGGAGCCGCGTGTCGTCGGCCTGGCGCTCTCCGGCAAGGGCCTCCGCGGCTACCTCCCGTCGGAGCTCGGCACCCTCCTCTACCTCCGCCGCCTCAACCTCCACACCAACGCCCTCCGCGGCGCCATCCCGGCGCAGCTCTTCAATGCCACCGCGCTCCACAGTGTCTTCCTCCACGGCAACAACCTCTCCGGCAACCTCCCTCCCTCCGTCTGCACCCTCCCCCGCCTCGAAAACCTCGACCTCTCCGACAACGCCCTCTCCGGTGCCATCCCCGATACGCTCCGAAAATGCTCCAACCTCCAGCGGCTAATCCTCGCCCGGAACAAATTCTCCGGCGAGATTCCGGCGAGTCCGTGGCCGGAGCTGAAAAGCCTAGTCCAGCTCGATCTATCATCGAACCTTCTAGAAGGTTCGATCCCGGACAAGCTCGGTGAGCTCAAAACCCTAACCGGAACCCTCAACCTCTCTTTCAACCACTTGTCTGGTAAAATCCCTAAATCTCTAGGGAACTTGCCTGTTGCCGTGAGCTTCGATCTTCGGAACAATGATTTGAGCGGTGAGATTCCCCAAATGGGGTCTTTTTCGAACCAGGGCCCCACCGCTTTCCTCAACAACCCGAACCTGTGCGGGTTTCCTCTGCAGAAACCCTGCACAGGTTCGGCGCCGAGCGAACCGGGGCTCAGCCCTGGTTCACGAAGGCCGGCGCACCGGTCTGCGAAGGGACTTAGCCCTGGTTTGATTATTTTGATCTCGGTGGCGGATGCCGCCGGGGTGGCCTTGATTGGGCTTGTGGTGGTTTATGTTTATTGGAAGAGGAAGGGCAAGTCCAATGGGTGTAGTTGCAGTTTGAAGAGGAAGTTTGGTGGGGAGAGTGAGAAGTTGAGTTTGTGTTGTTGGTGTAATGGGGTGAAGAGTGATGATTCTGAGGTGGAGGAGGGGGAGAAGGAAGAGGGAGAGGGTGGGAGGGGGGAAGGAGACTTGGTGGCCATTGATAAGGGTTTCAACTTTGAGCTTGATGAGTTGTTGAGGGCTTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGCTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTGGGGGAAGGTGGAGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCCATTGGCAAAGTGAAGCATCCCAACATTGTGAAGTTGAGAGCATATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGCAATTTGGCCACTGCCCTTAGAGGGAGAAATGGTCAACCATCCCCGAATCTTTCATGGTCAACCAGGCTGAAAATCATCAAAGGAGCAGCCAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATTAAACCCTCCAACCTCCTTCTCGACACTGACTTCCAACCCCATATTTCTGATTTTGGCCTAAACAGACTGATCAGTATAACAGGCAACAACCCCTCCTCTGGTGGCTTTATGGGAGGATCTCTTCCTTACTTGAAGCCATCACAAACAGAGCGAACTAACAACTACAAAGCCCCTGAGGCGCGAGTTCCAGGTTGCAGACCCACTCAGAAGTGGGATGTGTATTCATTTGGAGTTGTATTACTTGAATTGCTTACTGGGAAGTCCCCGGATTCTTCTCTGGCTGCATCAACTTCCATGGAAGTCCCTGACTTGGTGAGATGGGTTAGGAAAGGGTTTGAACAAGAAAGTCCATTATCTGAAATTGTTGATCCGTCGATGCTCCATGAAGTGCATGCCAAAAAAGAGCACTTGGAAGATTTTCTTGTGGGGGCATCAAGATGGAATTGCAAATACTTTTCCATCTCCAACTACGCCTTCAGGCCCTTCTATGTTTTGAAGTTAAAGCAATTTTTTGACGGCTATCCCCATCACAGTGTTCTAAAGATTGCCGGTGCTCACAAATTTGCAAACTAG 2187 0.5336 MTVTFFIFLLYFFFHPAVSLSSDGIALLTLKSAVDAPGAAAFSDWNDADATPCRWSGVTCANISGLPEPRVVGLALSGKGLRGYLPSELGTLLYLRRLNLHTNALRGAIPAQLFNATALHSVFLHGNNLSGNLPPSVCTLPRLENLDLSDNALSGAIPDTLRKCSNLQRLILARNKFSGEIPASPWPELKSLVQLDLSSNLLEGSIPDKLGELKTLTGTLNLSFNHLSGKIPKSLGNLPVAVSFDLRNNDLSGEIPQMGSFSNQGPTAFLNNPNLCGFPLQKPCTGSAPSEPGLSPGSRRPAHRSAKGLSPGLIILISVADAAGVALIGLVVVYVYWKRKGKSNGCSCSLKRKFGGESEKLSLCCWCNGVKSDDSEVEEGEKEEGEGGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLKIIKGAARGLAYLHECSPRKFVHGDIKPSNLLLDTDFQPHISDFGLNRLISITGNNPSSGGFMGGSLPYLKPSQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSLAASTSMEVPDLVRWVRKGFEQESPLSEIVDPSMLHEVHAKKEHLEDFLVGASRWNCKYFSISNYAFRPFYVLKLKQFFDGYPHHSVLKIAGAHKFAN 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01449 728 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Gma07g01449 728 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 680 - -
Gma07g01449 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Gma07g01449 728 SMART LRR_typ_2 92 116 IPR003591 -
Gma07g01449 728 SMART LRR_typ_2 189 213 IPR003591 -
Gma07g01449 728 SMART LRR_typ_2 140 163 IPR003591 -
Gma07g01449 728 ProSiteProfiles Protein kinase domain profile. 410 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01449 728 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
Gma07g01449 728 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Gma07g01449 728 Gene3D Phosphorylase Kinase; domain 1 398 485 - -
Gma07g01449 728 Pfam Protein kinase domain 415 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01449 728 Pfam Leucine rich repeat 141 202 IPR001611 GO:0005515
Gma07g01449 728 SUPERFAMILY L domain-like 21 281 - -
Gma07g01449 728 Gene3D Transferase(Phosphotransferase) domain 1 486 685 - -
Gma07g01449 728 SUPERFAMILY Protein kinase-like (PK-like) 415 639 IPR011009 -
Gma07g01449 728 SMART serkin_6 414 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01449 728 PRINTS Leucine-rich repeat signature 143 156 - -
Gma07g01449 728 PRINTS Leucine-rich repeat signature 189 202 - -
Gma07g01449 728 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01449 Gma-Chr7 19561613 19566425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01449 16 678 Receptor kinase-like Gene Family AT1G67510 69.016 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma07g01449 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01449 - - gmx:100795021 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01903 18 52019126 52023386 Gma07g01449 07 19561613 19566425 GST
Gma07g01449 07 19561613 19566425 Gma01g01282 01 45352673 45357788 PCT