Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01447 ATGATGTCAAGTGTTGTTTGGCCCACATGCCTTGCCTGGTTTCTTCTCTTCACATCAAACCTATGGTCTCAAAATACAATAACTACCTATGCATTAGGAAATGAGACTGATCATTTTGCACTGCTCAAATTCAAAGAATCAATATCTCATGACCCTTTTGAAGTGTTAAACTCTTGGAATAGTTCAAGCAACTTTTGCAAGTGGCATGGAGTCACATGTAGTCCACGACACCAAAGAGTTAAAGAGCTAAATCTAAGAGGATATCACTTGCATGGATTTATATCACCCTACATTGGGAGCCTTTCTTTATTGAGAATCCTCCTCCTTAATGACAATAGCTTCTACGGTGAAGTCCCGCAAGAATTGGATCGATTATTTCGATTACATGTACTCAATTTCGCTGATAACACATTATGGGGAGAATTTCCCATCAATTTGACAAATTGCTCTAAACTTATCCATTTAAGTTTAGAGGGAAATCGTTTCATTGGTGAAATACCAAGGAAGATTGGATCCTTTAGCAATCTTGAAGAGTTGCTTATTGGTAGGAACTATCTAACTAGACAAATTCCACCTTCCATAGGAAATCTATCTTCCCTCACTTGTCTTTCCTTGAGATCAAATAAATTGGAGGGGAACATACCAAAAGAAATAGGCTATTTGAAAAACTTGAGAATTTTGCGGGTGTCAGATAATAAACTATCTGGTTACATTCCTCTTTCCTTATACAATTTGTCATCTCTCAATGTCTTCATAATCACAAAAAACCAATTTAACGGTTCTTTTCCGGTCAACTTGTTCCTCACCTTGCCTAATCTCAATTTTTTTGCAGTTGGTGCGAATCAATTCTCCGGTTCAATTCCAACTTCCATCACTAATGCATCTGGGATTCAAACATTGGATATTGGTAATAACCTTTTGGTAGGACAAGTCCCAAGTCTAGGGAAGTTGAAAGATATTTCAATTCTACAACTAAATTTAAACAAACTGGGTAGCAATTCATCTAATGACTTACAATTTTTTAAGTCTTTGATAAATTGTAGTCAGCTAGAAATATTGGATATAGGGGACAATAATTTTGGAGGGCCTTTTCCTAGTTTTGTGGGTAATTATTCCATCACACTCACCCAACTAATTGTTGGTCGTAATCATTTTTTTGGAAAAATTCCTATGGAATTAGGAAATCTTGTTAACTTAATTACCTTGGCTATGGAGAAAAATTTCCTAACTGGCATCATTCCAACTACTTTTGGTAAGCTTCAAAAGATGCAATTATTAAGTTTAGGGGTAAACAAATTGATTGGAGAGATACCTTCTTCCATTGGCAATCTCAGTCAATTATATTACCTAGAATTATCATCTAATATGTTTGATGGAAATATTCCTTCAACAATTGGAAGTTGCCGACGTTTACAATTTCTAAATCTTTCAAAtaacaacatcactggagccataccttcacaagtgtttggaatttcctctttatctactgcactggtatcacataactcattaagtggcagtctaccaacagaaattggcatgctaaaaaatattgaatggttggatgtgtctaaaaattatatttccggtgtgattcctaaaacaattggagaatgcatgaagttggaatacctttatttagaggggaactccttccatggaagcatgcctccttcattggcttcattaaaaggtcttagaaaattagacctttcaagaaacaacttgtctggatcgattccggaaagactgcaaaatatttctgttctagaatacttcaatgcttctttcaacatgttggagggtgaggtaccaacaaatggtgtctttcaaaatgcaagtgcaatttcagtaactggcaatggcaagctttgcggtggggtatcTGAACTAAAACTTCCACCTTGCCCTTTAAAAGTTAAGGGTAAGAAAAGAAGAAAACACCATAATTTCAAGTTAGTGGTGATGATAATctgtttggttctttttcttcctatactatcatgtatccttggtatgtatttgataaggaaaaggaagaaaaagtcatctactaattcagcaattgatcaacttcctaaggtatcataccagaacctaaaccatgcaactgatggattctcatctcagaacttgataggaataggaagccatggctctgtatataaaggaagacttgattcaacagaaggatttgttgctataaaggttctaaaccttcaaaagaaagggtctaacaaaagttttgtggctgaatgtaaagcattaagaaatgttcggcatagaaacctagtgaaggctgtcacgtgttgctcaagtgtggattacaatggaaatgattttaaagctttagtgtttgagtacatgtcaaatagaagcttagaggaatggttgcatccacagaatggaagtgcagaacgaccaagaacattggaccttgagacaagattagaaattgtggttggcgttgcttctgcactacattatcttcaccatgagtgtgaggaaccaattattcactgtgatataaagccgagtaatgttcttcttgatgatgacatggttgctcatgtcagcgattttggcttagcaagacttgtctcgaaaatcgacaactgtcataaccaaattagtacaagtggaataaaaggaactataggttattttcccccagagtatggagccagttctcaggtgtcaacaaagggtgacatgtatagctttggcatcttaattctagagatcttaactgggagacgaccaacagaggaaatgtttaaagatggacaaacccttcatgactatgttaaaattgcacttccaaataacttctcggagattgttgatgcaactcttatttcaatgggaaatgaatcatctcctacaataacagtatcagaacaaaacaacatcttcgagattgtagatcatttgcatcctaataccaagaagtgcttgttttcattatttaggattggtctagcatgttcagtggagccaccgggacaaaggatgaatatGATGGAAGTCACCAAGGAGCTAAATATGATTAGAAATGTTTTTTATGCTCGAAGGATCAGAGATGGTTATTCAACAAGGCCAACTTCAGCAGCACTCACTGCGCTAACCCCTTCTCTCTCTCTCTCTCTGCTCGGTTCTCCGATCGCCGTCTTCGCCTTGCCCATTCCTGATCAATATGTCTAG 3207 0.1933 MMSSVVWPTCLAWFLLFTSNLWSQNTITTYALGNETDHFALLKFKESISHDPFEVLNSWNSSSNFCKWHGVTCSPRHQRVKELNLRGYHLHGFISPYIGSLSLLRILLLNDNSFYGEVPQELDRLFRLHVLNFADNTLWGEFPINLTNCSKLIHLSLEGNRFIGEIPRKIGSFSNLEELLIGRNYLTRQIPPSIGNLSSLTCLSLRSNKLEGNIPKEIGYLKNLRILRVSDNKLSGYIPLSLYNLSSLNVFIITKNQFNGSFPVNLFLTLPNLNFFAVGANQFSGSIPTSITNASGIQTLDIGNNLLVGQVPSLGKLKDISILQLNLNKLGSNSSNDLQFFKSLINCSQLEILDIGDNNFGGPFPSFVGNYSITLTQLIVGRNHFFGKIPMELGNLVNLITLAMEKNFLTGIIPTTFGKLQKMQLLSLGVNKLIGEIPSSIGNLSQLYYLELSSNMFDGNIPSTIGSCRRLQFLNLSNNNITGAIPSQVFGISSLSTALVSHNSLSGSLPTEIGMLKNIEWLDVSKNYISGVIPKTIGECMKLEYLYLEGNSFHGSMPPSLASLKGLRKLDLSRNNLSGSIPERLQNISVLEYFNASFNMLEGEVPTNGVFQNASAISVTGNGKLCGGVSELKLPPCPLKVKGKKRRKHHNFKLVVMIICLVLFLPILSCILGMYLIRKRKKKSSTNSAIDQLPKVSYQNLNHATDGFSSQNLIGIGSHGSVYKGRLDSTEGFVAIKVLNLQKKGSNKSFVAECKALRNVRHRNLVKAVTCCSSVDYNGNDFKALVFEYMSNRSLEEWLHPQNGSAERPRTLDLETRLEIVVGVASALHYLHHECEEPIIHCDIKPSNVLLDDDMVAHVSDFGLARLVSKIDNCHNQISTSGIKGTIGYFPPEYGASSQVSTKGDMYSFGILILEILTGRRPTEEMFKDGQTLHDYVKIALPNNFSEIVDATLISMGNESSPTITVSEQNNIFEIVDHLHPNTKKCLFSLFRIGLACSVEPPGQRMNMMEVTKELNMIRNVFYARRIRDGYSTRPTSAALTALTPSLSLSLLGSPIAVFALPIPDQYV 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01447 1068 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Gma07g01447 1068 Gene3D Phosphorylase Kinase; domain 1 673 789 - -
Gma07g01447 1068 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Gma07g01447 1068 SUPERFAMILY L domain-like 34 330 - -
Gma07g01447 1068 PANTHER OS04G0122200 PROTEIN 22 1025 - -
Gma07g01447 1068 SMART LRR_typ_2 221 245 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 516 540 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 173 197 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 396 419 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 564 587 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 469 492 IPR003591 -
Gma07g01447 1068 SMART LRR_typ_2 444 468 IPR003591 -
Gma07g01447 1068 Gene3D Ribonuclease Inhibitor 34 316 IPR032675 -
Gma07g01447 1068 PANTHER LRR RECEPTOR-LIKE KINASE 22 1025 - -
Gma07g01447 1068 Gene3D Transferase(Phosphotransferase) domain 1 790 1029 - -
Gma07g01447 1068 Pfam Protein kinase domain 710 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01447 1068 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Gma07g01447 1068 ProSiteProfiles Protein kinase domain profile. 708 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01447 1068 SMART serkin_6 708 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01447 1068 Gene3D Ribonuclease Inhibitor 317 638 IPR032675 -
Gma07g01447 1068 SUPERFAMILY L domain-like 374 627 - -
Gma07g01447 1068 SUPERFAMILY Protein kinase-like (PK-like) 682 1016 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01447 Gma-Chr7 19525030 19533409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01447 27 1023 Receptor kinase-like Gene Family AT3G47570 44.841 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma07g01447 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01447 - - gmx:100797146 1944.86