Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01430 ATGATGCAGTCAGAGGATCTGCAATTCCAATGGCCATTCTTTGAAGACATGAACTCAACTTTTGATCAAGGTGTTGAGTCCTATGGTTTCACCACCatggatgaccatgttggtaattgtgaaccttatggcttcactatggatgaccatgttggtaattgtgaaccttatggcttcactatggatgaccatgtcggtgattgtgGCCTCAGTACTCTATTGAGCACTCCAGGGGATTCTACTTCTGAAATTTGTTCCATCCCCTTTCCTTCCTCCCCCATGTTCTCCAATGATCATATTCATATCCAATACCCAATCAATGAAGAAACCATGGACCTTCCATCACTGATGGAATTGGATGATTTTTATTCCATCTTGGATACTCAAATTATTAGTATTCAAGGTCATGGAGAAAGTGAAGGGAGCTTCTTCCCTTCACAGAATTTGTCAAGTGAGGTGGAAAATGCATGGAGTCCAACCCCATCTGTGATGTCAGAATTGTCCACAAATCAAACATCACCATTGACCTTACCACTAGAAAACATGGAAATTGAAAAACAAGTGAGCCTTCCACACTTGTTGAAGGCCTATGGAGAAGCCTTGGAGCAAGGACAAAAAGCACTGGAAGAAGTGACTTTGAGGCGCATAAGCCAGAAAGCTAGTCCACTTGGTGAGTCTTTAGAGCGCTTTGCATTCTACTTGTCCCAAGGCATGACAAATCATGGAGACTATCTCAAAGGGGAGGCCTTCAAGAACTTTGGGATTACTTTGAGGGCACTCTATCAAGGATTCCCAATTGGGAAAATTGCTCACTTTGCAGCTGTTTCAACAATTCTTGAAGCCATGCCACAAGATTATGATGTTGTGCACATAGTGGACTTTTGTATTGGACATGGTGTTCAATGGCCTCCAATGATTGAGGCTATTGCACACATGCACAAAACATTGAAATTGACAACAATCAAATGGGGTGGTGAGGGTTCTGAATGTGTCTCTAGTCCATGCAATTTTGATGAAACTAGAAGGCAGCTCTATGAGCATGCCAAATCCTGTGGTTTGAAGTTGAAGGTAGAGGAGAAAGGCGTGGAGGAATTGGTTACTGAGATTAAGAAAATGAACAAAAAAGGTGGGAGGAGAGAGTTTTTGGCCTTCAATTGCATGATTGATCTGCCACATATGGGAAAAGTAAGGAGCAGAAAAAATGCCTTGCAGTTTCTAAGGGTAGCTGAGGAATTGATCAACACCTCTGGCAACAGGGGAATTATCACTTTTGGGGATGGGGGTGCTTTTGAGAAAGTGAAAAATAACTTGAATTTCTGGTCATTTTTTTATGGACACTTGGTGCATTACCAAATCTTGTTAGAATCAATGGAATCACATTTTCCAACCCGTTTCTCAGAAGTGAGAATTGCCATGGAGCAATTATTTTTACAACCTTGCATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGGGGTGACCATCTTGAGGCAGAGACTAGTTTAGAAGGTTGCCAATTAAGCAAAAATATCTTAATGGAAATCAGAGAAGTGTTGAGAGAAAGTGAAGGTTCCTATCAGGCCAAAATTGAAGGACAACATGACAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTAA 1677 0.3828 MMQSEDLQFQWPFFEDMNSTFDQGVESYGFTTMDDHVGNCEPYGFTMDDHVGNCEPYGFTMDDHVGDCGLSTLLSTPGDSTSEICSIPFPSSPMFSNDHIHIQYPINEETMDLPSLMELDDFYSILDTQIISIQGHGESEGSFFPSQNLSSEVENAWSPTPSVMSELSTNQTSPLTLPLENMEIEKQVSLPHLLKAYGEALEQGQKALEEVTLRRISQKASPLGESLERFAFYLSQGMTNHGDYLKGEAFKNFGITLRALYQGFPIGKIAHFAAVSTILEAMPQDYDVVHIVDFCIGHGVQWPPMIEAIAHMHKTLKLTTIKWGGEGSECVSSPCNFDETRRQLYEHAKSCGLKLKVEEKGVEELVTEIKKMNKKGGRREFLAFNCMIDLPHMGKVRSRKNALQFLRVAEELINTSGNRGIITFGDGGAFEKVKNNLNFWSFFYGHLVHYQILLESMESHFPTRFSEVRIAMEQLFLQPCISSLDWLQTWEEMKRGDHLEAETSLEGCQLSKNILMEIREVLRESEGSYQAKIEGQHDNELVLEYKGTQLLRFSTWKN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01430 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 557 IPR005202 -
Gma07g01430 558 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 40 557 - -
Gma07g01430 558 Coils Coil 355 375 - -
Gma07g01430 558 Pfam GRAS domain family 192 557 IPR005202 -
Gma07g01430 558 ProSiteProfiles GRAS family profile. 181 557 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01430 Gma-Chr7 19345000 19346873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01430 191 557 GRAS Transcription Factor Family AT5G66770 25.065 1.83e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma07g01430 GRAS 4.6e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01430 - - gmx:100792407 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01430 07 19345000 19346873 Gma07g01430 07 19345000 19346873 ECH
Gma18g01892 18 51890927 51892772 Gma07g01430 07 19345000 19346873 GST