Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01427 ATGCCTATACCTCTTAGCATATCTTTATTCTCTAAGCCTCTTATTATGGCTTCTCCAACTCTTGTATTTGTCTTCCTCCTATTTCTCTCTCTCTTACCCCAAGTTATTGCCTCCAAGGCTGTGATTTTTGAAGGATTCGATGATGAAAACAGTGAACTCAATCTTGAAGGATCTTCCATCATCAAAACCAGCCGTTTACTTAAACTCACCAACAGATCAACCAATATTGTAGGCCATGCATTCTATGCCACACCCTTCCAAATGCTTAACAACACAAACCAACCCTATGCTTATTCCTTCAGCACCAATTTTGTTTTCTCAATTGTGTCCCCAAGTTCTGGTTCTGGTGGCTTTGGCCTTGCCTTCACCATAGCACCCTCAACACAGTTTCCTGGGGCTGAGGCTGGCCATTATCTTGGCCTTGTTAACTCCACCAATGATGGGAATGAGTCAAACCACATCTTTGCAGTTGAGTTTGACACAATGAATGGTTACAAAGATGACTCAGACACTGAAGGAAACCATGTTGGGGTAAACATCAATGGCATGGACTCAAATATTACTGAACCAGCTGCATACATTAAAGAGGGCACTGATAAGGTAAAGGAAGATTTTAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATAGAATATGATGGTGAAAACAAAACTCTGAATGTAACAATAGCTCCTTTGTCAAAACCAAGGCCAAGCAAACCAATTATAAAGAATCATATCATTGATCTTTACAATGTTATGGAGGAAAGCATGTATGTTGGTTTCTCAGCATCAACAGGCCAGGAAACAAGCTCTCACTATCTTCTAGGGTGGAGTTTTGCAGTGAATGGTGTTGCCCCTCAACTGAAAATTTCCAACCTTCCAAATCCACCACCAAAAGAGAAAGAACCGACATCATTTCCTTGGGTCAATATTGCAATTGGCGTCTTGTCTGCTTCGACTTTTTGCCTCTTGTGTATTCTGTTTTGTATAACATGTTATAGGAGATATTATATGGACTTTGAGGTTCTTGAGGACTGGGAGATGGATTGTCCTCACAGGTTTAGGTACAAAGATCTTCACTTAGCCACAAAGGGGTTCATAGAGAGCCATCTCATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTGTTGCCTTCCACGGGAGCTGAGGTTGCTGTCAAGAGGATTGTGAGAAGCCCTTTCCATGGAATGAGGGAATTTGCTGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATTTGGTGAACCTTCAAGGTTGGTGCAACAAAAAGAATGATCTACTCTTGGTCTATGATTTCATCCCAAATGGTAGCCTTGATTATGTCCTATATAAACCCAACAACAACAACTTTGTTTTGAATTGGGGGCAAAGATTCAACATTCTCAAAGGCATTAGTGCTGGACTATTATATTTGCATGAAGAGTGGGAGCAAGTCGTGATCCATAGAGATGTGAAAACTAGCAACATTTTGATAGATGCACACTTGAATGCACGTTTAGGTGACTTTGGACTGGCGAGGCTCTATAACCATGGTCAATTGTCACACACAACAAGTGTGGTTGGCACTATTGGTTACATTGCACCAGAGTTAACTCGCACAGGAAAGGCTTCCACAAGCACAGATGTGTATGCATTTGGGGTTGTGCTCCTTGAAGTTGCCACAGGTAAGAGGCCTCTTGATTCGGATCAGTTTTTCTTGGTGGAGTGGGTTATTGAGAAGTACCACTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTTGATTCACTTTATGATGAGGAAGAAATTGAGTTGGTTCTGAAATTGGGTTTACTTTGCACTCAGCATAGAGCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACTTGAACTTTGATGAACCTCTTCCTGATATTGTTGATTGGGGACATGGTGTTTCTGGGAGCAGTAGATTGAGTTCAGGTTTCTTAGAAGTTACGTATTCTATGGGAACTGTTGAAACATTAGGGTATTTGTCATCCATTAGCATGAGTACTAAGTCCATAGATGCTGGTAGGCAGCAAATAATCATATAG 2091 0.4161 MPIPLSISLFSKPLIMASPTLVFVFLLFLSLLPQVIASKAVIFEGFDDENSELNLEGSSIIKTSRLLKLTNRSTNIVGHAFYATPFQMLNNTNQPYAYSFSTNFVFSIVSPSSGSGGFGLAFTIAPSTQFPGAEAGHYLGLVNSTNDGNESNHIFAVEFDTMNGYKDDSDTEGNHVGVNINGMDSNITEPAAYIKEGTDKVKEDFRMAKVDAVQAWIEYDGENKTLNVTIAPLSKPRPSKPIIKNHIIDLYNVMEESMYVGFSASTGQETSSHYLLGWSFAVNGVAPQLKISNLPNPPPKEKEPTSFPWVNIAIGVLSASTFCLLCILFCITCYRRYYMDFEVLEDWEMDCPHRFRYKDLHLATKGFIESHLIGVGGFGAVYKGVLPSTGAEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCNKKNDLLLVYDFIPNGSLDYVLYKPNNNNFVLNWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDAHLNARLGDFGLARLYNHGQLSHTTSVVGTIGYIAPELTRTGKASTSTDVYAFGVVLLEVATGKRPLDSDQFFLVEWVIEKYHLGQILEVVDPKLDSLYDEEEIELVLKLGLLCTQHRADYRPTMKQVTRYLNFDEPLPDIVDWGHGVSGSSRLSSGFLEVTYSMGTVETLGYLSSISMSTKSIDAGRQQIII 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01427 696 Gene3D Transferase(Phosphotransferase) domain 1 444 640 - -
Gma07g01427 696 ProSiteProfiles Protein kinase domain profile. 367 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01427 696 SUPERFAMILY Protein kinase-like (PK-like) 350 639 IPR011009 -
Gma07g01427 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 23 679 - -
Gma07g01427 696 CDD STKc_IRAK 373 636 - -
Gma07g01427 696 SMART serkin_6 367 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01427 696 Gene3D Phosphorylase Kinase; domain 1 352 443 - -
Gma07g01427 696 PANTHER - 23 679 - -
Gma07g01427 696 Pfam Legume lectin domain 42 295 IPR001220 GO:0030246
Gma07g01427 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 299 IPR013320 -
Gma07g01427 696 CDD lectin_legume_LecRK_Arcelin_ConA 42 284 IPR001220 GO:0030246
Gma07g01427 696 Gene3D - 40 284 - -
Gma07g01427 696 Pfam Protein kinase domain 369 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g01427 696 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Gma07g01427 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01427 Gma-Chr7 19303987 19306077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01427 42 666 Receptor kinase-like Gene Family AT5G01560 50.079 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma07g01427 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01427 - - gmx:100791358 1376.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01427 07 19303987 19306077 Gma07g01427 07 19303987 19306077 ECH
Gma03g00567 03 15823550 15825868 Gma07g01427 07 19303987 19306077 PCT