Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01425 ATGCAAGGAGGAGCAAGCCCCGTGATTCCCGACGAAAGGGCATATATTTCATATTATCTTTTGAGAGATCAATCTACGATTTGGACTATTTCACTATCTGGGTATCACATATATAGTTTCCAAGGCAAGTGTGTGCGTGGAAGGATTATGAGGATGGAAGAAGAGAGACATGGCTCGGAATGTTCAAAGACAAGCCCTTCTAACGAAGAAGGTTGTGAAGAAGAAAGTGAGGGCAATGAAGATGAAAGCAAGCCAAACAACAACAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGACCACAGTGAGGCCTTATGTTAGATCTAAGATGCCAAGGCTACGATGGACACCTGATCTTCATCTTCGCTTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAACATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGACACAAATCAAGTATTGGCTGATCCTAGGCTTCTTGTAGAAACTGGAGACAGAAATGTTTACAATCTTAGCCAACTTCCCATGCTTCAAGGCTATAATCCAAGCCAAAGTTCAGCATACAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGCATGGGCCTTTCATGAATAGAAGTTCCTTGGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTGACTCATGGGACCAATAGTAACATCAATTGGATTCATAATATGTTCCAAGTTGATTCTTCTTCTAGTTTTAATGAACCATCAACAAGCAAAGTTCATGAACCAAAACATAAGTTCTTCTCATTTGGTGGCAATGAATCCTCATCCACACAAATCAAAATGAGCCAGGTTGATCTACATCTATCAACTCAACCGCAGCCAAGTGCACAAGAACTCATGCCTAATAATAAGTTTACAACAAATGAGATGGAACTGAAGACCTTGAAAAGGAAGGCTTCAGATATTGACCTTGATTTGAATCTATCACTTAAGTTAAATTCAAGGGTCAGTGCTGAGAACCAAGGAAGCATGGTGGACCATGAAGTTGTTGATAGCAATCTATCACTCTCTTTGTGTTCTCAATCCTCCTCCTTTAGCAGCAGCAGGTTGAAAAAAGCACAAGATCATTCTAAGGAGCAAGGGGAAATTATTAGAGCCAGTACTCTGGATCTGACTATATGA 1248 0.4071 MQGGASPVIPDERAYISYYLLRDQSTIWTISLSGYHIYSFQGKCVRGRIMRMEEERHGSECSKTSPSNEEGCEEESEGNEDESKPNNNNGGSSSNSTVEENEKKTTVRPYVRSKMPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDTNQVLADPRLLVETGDRNVYNLSQLPMLQGYNPSQSSAYRYGYGDASLAIYENMVHGPFMNRSSLDESGAEFCGSRLTHGTNSNINWIHNMFQVDSSSSFNEPSTSKVHEPKHKFFSFGGNESSSTQIKMSQVDLHLSTQPQPSAQELMPNNKFTTNEMELKTLKRKASDIDLDLNLSLKLNSRVSAENQGSMVDHEVVDSNLSLSLCSQSSSFSSSRLKKAQDHSKEQGEIIRASTLDLTI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01425 415 Gene3D - 115 172 - -
Gma07g01425 415 MobiDBLite consensus disorder prediction 55 110 - -
Gma07g01425 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 58 415 IPR044848 GO:0003700
Gma07g01425 415 SUPERFAMILY Homeodomain-like 114 170 IPR009057 -
Gma07g01425 415 Pfam Myb-like DNA-binding domain 118 168 IPR001005 -
Gma07g01425 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 171 IPR006447 GO:0003677
Gma07g01425 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 172 IPR017930 -
Gma07g01425 415 MobiDBLite consensus disorder prediction 55 70 - -
Gma07g01425 415 MobiDBLite consensus disorder prediction 83 100 - -
Gma07g01425 415 PANTHER - 58 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01425 Gma-Chr7 19280467 19284538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01425 107 173 G2-like Transcription Factor Family AT2G42660 80.597 7.91e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma07g01425 Myb_DNA-binding 9.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01425 - - gmx:102662997 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01425 07 19280467 19284538 Gma07g01425 07 19280467 19284538 ECH
Gma18g01890 18 51841741 51843799 Gma07g01425 07 19280467 19284538 GST