Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01424 ATGGCTACACCCTTGGCCTACCAAGAGCACCTTCCGGCGGCACCCGAATGGCTGAACAAAGGTGACAACGCATGGCAGCTAACAGCAGCCACCCTCGTCGGTCTTCAAAGCATGCCGGGTCTCGTGATCCTCTACGCCAGCATAGTGAAGAAAAAATGGGCAGTGAACTCAGCTTTCATGGCTCTCTACGCCTTTGCGGCGGTTCTAATATGTTGGGTGCTTGTGTGTTACCGAATGGCCTTTGGAGAAGAACTTTTCCCCTTCTGGGGAAAGGGTGCTCCAGCACTAGGCCAGAAGTTCCTCACGAAAAGAGCCATAGTCATTGAAACCATCCACCACTTTGATAATGGCACTGTTGAATCACCTCCTGAGGAACCCTTTTACCCTATGGCCTCGCTTGTGTATTTCCAATTCACTTTTGCTGCTATTACTCTTATTTTGTTGGCTGGCTCTGTCCTTGGCCGAATGAACATCAAGGCTTGGATGGCTTTTGTGCCTCTTTGGTTGATCTTTTCCTACACAGTCGGGGCTTTTAGTCTTTGGGGTGGTGGCTTTCTCTACCAATGGGGCGTTATTGATTATTCTGGCGGCTATGTCATACACCTTTCTTCTGGAATCGCTGGCTTCACTGCTGCTTACTGGGTTGGACCAAGGTTGAAGAGTGATAGGGAGAGGTTCCCACCAAACAATGTGCTTCTCATGCTTGCTGGTGCTGGGTTGTTGTGGATGGGGTGGTCAGGGTTCAACGGTGGAGCACCATATGCTGCAAACATTGCATCTTCAATTGCGGTGTTGAACACAAACATTTGTGCAGCCACTAGCCTCCTTGTGTGGACAACTTTGGATGTCATTTTTTTTGGGAAACCTTCGGTGATTGGAGCTGTGCAGGGCATGATGACTGGACTTGTATGCATCACCCCAGGGGCAGGGCTTGTGCAATCATGGGCTGCTATAGTGATGGGAATATTATCTGGGAGCATTCCATGGGTGACTATGATGATTTTGCATAAAAAGTCAACTTTGCTACAGAAGGTAGATGACACCCTTGGTGTGTTTCACACACATGCTGTGGCTGGCCTTTTGGGTGGTCTCCTCACAGGTCTATTAGCAGAACCAGCCCTTTGTAGACTTCTATTGCCAGTAACAAATTCAAGGGGTGCATTCTATGGTGGAGGTGGTGGTGTGCAGTTCTTCAAGCAATTGGTGGCGGCCATGTTTGTTATTGGATGGAACTTGGTGTCCACCACCATTATTCTCCTTGTCATAAAATTGTTCATACCCTTGAGGATGCCGGACGAGCAGCTGGAAATCGGTGACGACGCCGTCCACGGTGAGGAAGCTTATGCCCTTTGGGGTGATGGAGAAAAATATGACCCAACTAGGCATGGTTCCTTGCAAAGTGGCAACACTACTGTCTCACCTTATGTTAATGGTGCAAGAGGGGTGACTATAAACTTATGA 1461 0.4873 MATPLAYQEHLPAAPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGEELFPFWGKGAPALGQKFLTKRAIVIETIHHFDNGTVESPPEEPFYPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIASSIAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPALCRLLLPVTNSRGAFYGGGGGVQFFKQLVAAMFVIGWNLVSTTIILLVIKLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSLQSGNTTVSPYVNGARGVTINL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01424 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gma07g01424 486 PANTHER AMMONIUM TRANSPORTER 1 483 - -
Gma07g01424 486 TIGRFAM amt: ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma07g01424 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005887
Gma07g01424 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005887
Gma07g01424 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005887
Gma07g01424 486 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005887
Gma07g01424 486 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005887
Gma07g01424 486 Gene3D Ammonium transporter AmtB like domains 4 451 IPR029020 -
Gma07g01424 486 PANTHER AMMONIUM TRANSPORTER MEP2 1 483 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma07g01424 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma07g01424 486 SUPERFAMILY Ammonium transporter 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01424 Gma-Chr7 19145546 19149914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01424 130 486 Inorganic Solute Cotransporters AT2G38290 77.994 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01424 K03320 - gmx:100790119 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01424 07 19145546 19149914 Gma07g01424 07 19145546 19149914 ECH
Gma07g01424 07 19145546 19149914 Gma20g00032 20 430727 431834 GST